RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 BCL7AQ4VC05 210 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 KRTAP1-3Q8IUG1 177 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 CCDC71Q8IV32 467 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-212ENST00000489378 MCATQ8IVS2 390 aaKnown RBP8.73□□□□□ -1.01
SSBP1-212ENST00000489378 GHDCQ8N2G8 530 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 DTX3LQ8TDB6 740 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 ASB5Q8WWX0 329 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 HDAC10Q969S8 669 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 IMP4Q96G21 291 aaKnown RBP8.73□□□□□ -1.01
SSBP1-212ENST00000489378 LINC00615Q96LM1 132 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-212ENST00000489378 PWWP2AQ96N64 755 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 SIGLEC12Q96PQ1 595 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 OR52A5Q9H2C5 316 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 CLEC4MQ9H2X3 399 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-212ENST00000489378 TAB2Q9NYJ8 693 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 IL17CQ9P0M4 197 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 L3MBTL1Q9Y468 752 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 ANK3Q12955 4377 aaKnown RBP8.73□□□□□ -1.01
SSBP1-212ENST00000489378 FAM237BA0A1B0GVD1 139 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 A0A1W2PQ72 361 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 KLHL33A6NCF5 533 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 KLK8O60259 260 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 NDST3O95803 873 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 TPBGLP0DKB5 382 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 PEBP1P30086 187 aaKnown RBP8.72□□□□□ -1.01
SSBP1-212ENST00000489378 ARSEP51690 589 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 DLX5P56178 289 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 YBX1P67809 324 aaKnown RBP8.72□□□□□ -1.01
SSBP1-212ENST00000489378 FANCCQ00597 558 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 GBE1Q04446 702 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 SLC10A2Q12908 348 aaPredicted RBP8.72□□□□□ -1.01
SSBP1-212ENST00000489378 BOP1Q14137 746 aaKnown RBP8.72□□□□□ -1.01
SSBP1-212ENST00000489378 KRT81Q14533 505 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 ZZZ3Q8IYH5 903 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 EID3Q8N140 333 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 MDS2Q8NDY4 140 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 ACRBPQ8NEB7 543 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 SPATA22Q8NHS9 363 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 HM13Q8TCT9 377 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 TADA1Q96BN2 335 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 MIEF2Q96C03 454 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 MVB12BQ9H7P6 319 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 SMOXQ9NWM0 555 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 ANKRD10Q9NXR5 420 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 SONP18583 2426 aaKnown RBP8.72□□□□□ -1.01
SSBP1-212ENST00000489378 SCN2AQ99250 2005 aa8.72□□□□□ -1.01
SSBP1-212ENST00000489378 TPOP07202 933 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 MAGP20916 626 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 HOXC12P31275 282 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 PTGER1P34995 402 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 IFI35P80217 286 aaPredicted RBP8.71□□□□□ -1.01
SSBP1-212ENST00000489378 SLC25A11Q02978 314 aaKnown RBP8.71□□□□□ -1.01
SSBP1-212ENST00000489378 SNTB1Q13884 538 aaKnown RBP8.71□□□□□ -1.01
SSBP1-212ENST00000489378 PTPRCAPQ14761 206 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 DEFB113Q30KQ7 82 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 ZNF658BQ4V348 819 aaPredicted RBP8.71□□□□□ -1.01
SSBP1-212ENST00000489378 CCDC183Q5T5S1 534 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 ZDHHC20Q5W0Z9 365 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 FCRLBQ6BAA4 426 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 LINC00114Q6XXX2 140 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 CAMKMTQ7Z624 323 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 CD163Q86VB7 1156 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 CDC20BQ86Y33 519 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 BEST3Q8N1M1 668 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 RPRMLQ8N4K4 120 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 CCNYQ8ND76 341 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 OR5AR1Q8NGP9 310 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 DENND1AQ8TEH3 1009 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 EDARADDQ8WWZ3 215 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 SCMH1Q96GD3 660 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 SYT11Q9BT88 431 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 COG4Q9H9E3 785 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 RASSF1Q9NS23 344 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 RIC8BQ9NVN3 520 aa8.71□□□□□ -1.01
SSBP1-212ENST00000489378 A8MUI8 341 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 ISM1B1AKI9 464 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 INAFM1C9JVW0 142 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 IFRD1O00458 451 aaPredicted RBP8.71□□□□□ -1.02
SSBP1-212ENST00000489378 FFAR3O14843 346 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 GPR42O15529 346 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 ATE1O95260 518 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 CXCR2P25025 360 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 EEF1DP29692 281 aaKnown RBP8.71□□□□□ -1.02
SSBP1-212ENST00000489378 SHMT2P34897 504 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 CD96P40200 585 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 GRIA3P42263 894 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 CHRNA4P43681 627 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 EMP2P54851 167 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 OCA2Q04671 838 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 TUBA3CQ13748 450 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 ITGA9Q13797 1035 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 DPYSL3Q14195 570 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 GRM7Q14831 915 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 TCP11X2Q5H9J9 407 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 YOD1Q5VVQ6 348 aaPredicted RBP8.71□□□□□ -1.02
SSBP1-212ENST00000489378 SPINK14Q6IE38 97 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 TMEM214Q6NUQ4 689 aaKnown RBP8.71□□□□□ -1.02
SSBP1-212ENST00000489378 TUBA3EQ6PEY2 450 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 KDELC1Q6UW63 502 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 PAMR1Q6UXH9 720 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms