RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ELP6Q0PNE2 266 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 CSTF3Q12996 717 aaKnown RBP8.24□□□□□ -1.09
VTI1A-207ENST00000489357 PHKG1Q16816 387 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 AP5B1Q2VPB7 878 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 VPS26BQ4G0F5 336 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 SFT2D3Q587I9 215 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 COX20Q5RI15 118 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 LY6G5CQ5SRR4 150 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 LIPJQ5W064 366 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 LPCAT4Q643R3 524 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 OR52E8Q6IFG1 317 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 CYP20A1Q6UW02 462 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 UBE2R2Q712K3 238 aaPredicted RBP8.24□□□□□ -1.09
VTI1A-207ENST00000489357 ERMP1Q7Z2K6 904 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 TSPAN33Q86UF1 283 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 TBC1D21Q8IYX1 336 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 HIPK4Q8NE63 616 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 TMIEQ8NEW7 156 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 OR2T11Q8NH01 316 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 BTN2A2Q8WVV5 523 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 TMEM125Q96AQ2 219 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 EME1Q96AY2 570 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 FBXL8Q96CD0 374 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 MSANTD3Q96H12 275 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 HSH2DQ96JZ2 352 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 ZNF514Q96K75 400 aaPredicted RBP8.24□□□□□ -1.09
VTI1A-207ENST00000489357 MRGPRX3Q96LB0 322 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 ZNF597Q96LX8 424 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 KLHL32Q96NJ5 620 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 CCDC115Q96NT0 180 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 TMEM79Q9BSE2 394 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 OSBPL11Q9BXB4 747 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 SAP130Q9H0E3 1048 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 EPB41L1Q9H4G0 881 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 C1orf109Q9NX04 203 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 ARL15Q9NXU5 204 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 PRSS21Q9Y6M0 314 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 MUC6Q6W4X9 2439 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 FANCMQ8IYD8 2048 aa8.24□□□□□ -1.09
VTI1A-207ENST00000489357 DHRS12A0PJE2 317 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 KLHL33A6NCF5 533 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 MANBAO00462 879 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 SCAMP3O14828 347 aaKnown RBP8.23□□□□□ -1.09
VTI1A-207ENST00000489357 ATG13O75143 517 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 ERN1O75460 977 aaKnown RBP8.23□□□□□ -1.09
VTI1A-207ENST00000489357 KCNH1O95259 989 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 TNFAIP8O95379 198 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 ADH5P11766 374 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 CD1EP15812 388 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 GKP32189 559 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 MMP12P39900 470 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 ARL1P40616 181 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-207ENST00000489357 PRLHRP49683 370 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 AQP4P55087 323 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 C21orf58P58505 322 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 B4GALNT1Q00973 533 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 FOLH1Q04609 750 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 LRRC74AQ0VAA2 488 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 ABRQ12979 859 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 PWP1Q13610 501 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 RUNX3Q13761 415 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 PDK3Q15120 406 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 PDGFRLQ15198 375 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 PTPRRQ15256 657 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 DHCR24Q15392 516 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 MLF2Q15773 248 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-207ENST00000489357 IMPG1Q17R60 797 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 CWF19L1Q69YN2 538 aaKnown RBP8.23□□□□□ -1.09
VTI1A-207ENST00000489357 TECPR1Q7Z6L1 1165 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 SFRP1Q8N474 314 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 FBXL6Q8N531 539 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 MFSD2AQ8NA29 543 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 TRPV3Q8NET8 790 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 LKAAEAR1Q8TD35 194 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 CSGALNACT1Q8TDX6 532 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 CLDN23Q96B33 292 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 TESCQ96BS2 214 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 PPP1R16AQ96I34 528 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 SHDQ96IW2 340 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 ZFYVE19Q96K21 471 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 ACOX2Q99424 681 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 NELL2Q99435 816 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 PKP2Q99959 881 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 CENPKQ9BS16 269 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 C9orf16Q9BUW7 83 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 SPATA16Q9BXB7 569 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 EBF3Q9H4W6 596 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 ACTR8Q9H981 624 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 COPS7BQ9H9Q2 264 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-207ENST00000489357 LRTM1Q9HBL6 345 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 AGPAT4Q9NRZ5 378 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 DNAJC11Q9NVH1 559 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 THG1LQ9NWX6 298 aaKnown RBP8.23□□□□□ -1.09
VTI1A-207ENST00000489357 CMTM6Q9NX76 183 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 ELOVL2Q9NXB9 296 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 GPRC5BQ9NZH0 403 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 DLGAP2Q9P1A6 1054 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 SLCO3A1Q9UIG8 710 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 PDE10AQ9Y233 779 aa8.23□□□□□ -1.09
VTI1A-207ENST00000489357 PTGDR2Q9Y5Y4 395 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms