RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 A6NNZ2 444 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 ERI2A8K979 691 aaKnown RBP7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 A8MX80 341 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 TPP1O14773 563 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 ZNF185O15231 689 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 CBFA2T3O75081 653 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 HEXIM1O94992 359 aaKnown RBP7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 GAS8O95995 478 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 FGF1P05230 155 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 ALPIP09923 528 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 H2AFXP16104 143 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 CD38P28907 300 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 HNF1BP35680 557 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 KCNJ5P48544 419 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 CSRP3P50461 194 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 AGFG1P52594 562 aaKnown RBP7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 OVGP1Q12889 678 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 SIX1Q15475 284 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 DENND2CQ68D51 928 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 CCDC137Q6PK04 289 aaKnown RBP7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 IQCHQ86VS3 1027 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 MARCH9Q86YJ5 346 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 PRELID2Q8N945 189 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 FAM156AQ8NDB6 213 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 TBC1D15Q8TC07 691 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 SETD7Q8WTS6 366 aaKnown RBP7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 VOPP1Q96AW1 172 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 TADA1Q96BN2 335 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 RTP4Q96DX8 246 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 NSMCE3Q96MG7 304 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 RUNDC3BQ96NL0 473 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 LENG8Q96PV6 779 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 MCCC1Q96RQ3 725 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 AP1M1Q9BXS5 423 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 GPR63Q9BZJ6 419 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 TRABDQ9H4I3 376 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 LRRC40Q9H9A6 602 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 PKD2L2Q9NZM6 624 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 FAM30AQ9NZY2 134 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 HACD3Q9P035 362 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 HS3ST3A1Q9Y663 406 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 NUMA1Q14980 2115 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 C1orf232A0A0U1RR37 186 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 LOC285095A0A1B0GVY8 99 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 RGSL1A5PLK6 1076 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 FAM149AA5PLN7 773 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 NPIPB15A6NHN6 443 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 CCDC188H7C350 402 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 TOR1BO14657 336 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 VILLO15195 856 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 ATP8B1O43520 1251 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 RRP9O43818 475 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 SLC28A2O43868 658 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 RECQL5O94762 991 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 CER1O95813 267 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 PYGLP06737 847 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 SBK3P0C264 359 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 COILP38432 576 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 RABIFP47224 123 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 KCNJ1P48048 391 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 FNTAP49354 379 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 CSNK1EP49674 416 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 SEMG2Q02383 582 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 RALGDSQ12967 914 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 PTK2BQ14289 1009 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 CNN3Q15417 329 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 PPP1R7Q15435 360 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 CNGA3Q16281 694 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 CYP1B1Q16678 543 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 MAP9Q49MG5 647 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 GLE1Q53GS7 698 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 SIRPB2Q5JXA9 342 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 FAM182AQ5T1J6 154 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 RNF220Q5VTB9 566 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 LRRC66Q68CR7 880 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 PCSK4Q6UW60 755 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 KDELC1Q6UW63 502 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 Q6ZRM9 215 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 PTAR1Q7Z6K3 402 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 LINC00523Q86TU6 105 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 NRSN1Q8IZ57 195 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 MMGT1Q8N4V1 131 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 SLC25A41Q8N5S1 370 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 NXPE2Q96DL1 559 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 NUS1Q96E22 293 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 WBP1Q96G27 269 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 OXNAD1Q96HP4 312 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 TRIB3Q96RU7 358 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 LYSMD1Q96S90 227 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 DCLRE1CQ96SD1 692 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 TBL1YQ9BQ87 522 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 FICDQ9BVA6 458 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 C1orf43Q9BWL3 253 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 PARD6BQ9BYG5 372 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 MRPL46Q9H2W6 279 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 EBF2Q9HAK2 575 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 MAGEE1Q9HCI5 957 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 ARFGAP3Q9NP61 516 aa7.93□□□□□ -1.14
TRAPPC12-221ENST00000489032 FZD3Q9NPG1 666 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms