RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 CALML6Q8TD86 181 aa22.15■■□□□ 1.14
CUL4A-209ENST00000488558 NACC2Q96BF6 587 aa22.15■■□□□ 1.14
CUL4A-209ENST00000488558 PTERQ96BW5 349 aa22.15■■□□□ 1.14
CUL4A-209ENST00000488558 FAM136AQ96C01 138 aa22.15■■□□□ 1.14
CUL4A-209ENST00000488558 SIGLEC10Q96LC7 697 aa22.15■■□□□ 1.14
CUL4A-209ENST00000488558 SELENOSQ9BQE4 189 aa22.15■■□□□ 1.14
CUL4A-209ENST00000488558 WDR54Q9H977 334 aa22.15■■□□□ 1.14
CUL4A-209ENST00000488558 IL1RAPL1Q9NZN1 696 aa22.15■■□□□ 1.14
CUL4A-209ENST00000488558 GALPQ9UBC7 116 aa22.15■■□□□ 1.14
CUL4A-209ENST00000488558 COMMD10Q9Y6G5 202 aa22.15■■□□□ 1.14
CUL4A-209ENST00000488558 FLNCQ14315 2725 aa22.15■■□□□ 1.14
CUL4A-209ENST00000488558 CTAGE9A4FU28 777 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 CNOT3O75175 753 aaKnown RBP22.14■■□□□ 1.13
CUL4A-209ENST00000488558 ALBP02768 609 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 CATP04040 527 aaKnown RBP22.14■■□□□ 1.13
CUL4A-209ENST00000488558 PIM1P11309 404 aaPredicted RBP22.14■■□□□ 1.13
CUL4A-209ENST00000488558 PSMB5P28074 263 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 OTX2P32243 289 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 HSD17B2P37059 387 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 CD97P48960 835 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 KLHL38Q2WGJ6 581 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 RNASEH2BQ5TBB1 312 aaKnown RBP22.14■■□□□ 1.13
CUL4A-209ENST00000488558 TTLL10Q6ZVT0 673 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 RNF44Q7L0R7 432 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 DENND6AQ8IWF6 608 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 AGGF1Q8N302 714 aaeCLIP22.14■■□□□ 1.13
CUL4A-209ENST00000488558 TTC29Q8NA56 475 aaPredicted RBP22.14■■□□□ 1.13
CUL4A-209ENST00000488558 FDCSPQ8NFU4 85 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 SLCO2A1Q92959 643 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 MIB2Q96AX9 1013 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 FER1L6-AS2Q96M78 137 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 MIPEPQ99797 713 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 CCDC68Q9H2F9 335 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 SLC22A11Q9NSA0 550 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 CUTCQ9NTM9 273 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 ANKMY1Q9P2S6 941 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 MED16Q9Y2X0 877 aa22.14■■□□□ 1.13
CUL4A-209ENST00000488558 SPENQ96T58 3664 aaKnown RBP22.13■■□□□ 1.13
CUL4A-209ENST00000488558 KRT87PA6NCN2 255 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 CTSVO60911 334 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 ENO3P13929 434 aaPredicted RBP22.13■■□□□ 1.13
CUL4A-209ENST00000488558 ITGAXP20702 1163 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 SLC1A2P43004 574 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 PPP1R7Q15435 360 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 FAM214AQ32MH5 1076 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 SMPDL3AQ92484 453 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 FAM167BQ9BTA0 163 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 SLC26A1Q9H2B4 701 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 FBXO6Q9NRD1 293 aaPredicted RBP22.13■■□□□ 1.13
CUL4A-209ENST00000488558 C20orf96Q9NUD7 363 aaPredicted RBP22.13■■□□□ 1.13
CUL4A-209ENST00000488558 GPR83Q9NYM4 423 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 MAD1L1Q9Y6D9 718 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 CCDC88CQ9P219 2028 aa22.13■■□□□ 1.13
CUL4A-209ENST00000488558 OR2A25A4D2G3 310 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 ZNF839A8K0R7 811 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 EIF3FO00303 357 aaPredicted RBP22.12■■□□□ 1.13
CUL4A-209ENST00000488558 PEX12O00623 359 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 DPM1O60762 260 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 MPC1LP0DKB6 136 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 ALAS2P22557 587 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 CMPK1P30085 196 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 CTBP1Q13363 440 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 SLC9A5Q14940 896 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 IGFBP7Q16270 282 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 ZNF549Q6P9A3 640 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 OVCH1Q7RTY7 1134 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 PPP1R32Q7Z5V6 425 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 GIMAP7Q8NHV1 300 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 SMAD5Q99717 465 aaKnown RBP22.12■■□□□ 1.13
CUL4A-209ENST00000488558 NUDT9Q9BW91 350 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 KCNF1Q9H3M0 494 aa22.12■■□□□ 1.13
CUL4A-209ENST00000488558 TSR3Q9UJK0 312 aaKnown RBP22.12■■□□□ 1.13
CUL4A-209ENST00000488558 ANKRD12Q6UB98 2062 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 ZNF185O15231 689 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 KLHL41O60662 606 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 UMODP07911 640 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 TCP1P17987 556 aaKnown RBP22.11■■□□□ 1.13
CUL4A-209ENST00000488558 PGAM1P18669 254 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 PTK6Q13882 451 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 FASTKQ14296 549 aaKnown RBP22.11■■□□□ 1.13
CUL4A-209ENST00000488558 COLEC12Q5KU26 742 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 DCAF10Q5QP82 559 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 ATCAYQ86WG3 371 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 CLEC1AQ8NC01 280 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.11■■□□□ 1.13
CUL4A-209ENST00000488558 SLC30A3Q99726 388 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 P4HTMQ9NXG6 502 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 C5AR2Q9P296 337 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 NXT1Q9UKK6 140 aaKnown RBP22.11■■□□□ 1.13
CUL4A-209ENST00000488558 FBXO5Q9UKT4 447 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 DHRS7Q9Y394 339 aa22.11■■□□□ 1.13
CUL4A-209ENST00000488558 DNALI1O14645 258 aaPredicted RBP22.1■■□□□ 1.13
CUL4A-209ENST00000488558 SORBS2O94875 1100 aaKnown RBP22.1■■□□□ 1.13
CUL4A-209ENST00000488558 CCNDBP1O95273 360 aa22.1■■□□□ 1.13
CUL4A-209ENST00000488558 MCM3P25205 808 aa22.1■■□□□ 1.13
CUL4A-209ENST00000488558 PNLIPRP1P54315 467 aa22.1■■□□□ 1.13
CUL4A-209ENST00000488558 VSX2P58304 361 aaPredicted RBP22.1■■□□□ 1.13
CUL4A-209ENST00000488558 VWA5B1Q5TIE3 1220 aa22.1■■□□□ 1.13
CUL4A-209ENST00000488558 FRMPD2BQ6IN97 320 aa22.1■■□□□ 1.13
CUL4A-209ENST00000488558 PCGF5Q86SE9 256 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms