RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 STOX2Q9P2F5 926 aaPredicted RBP9.96□□□□□ -0.82
SKA1-204ENST00000488454 EPHA6Q9UF33 1036 aa9.96□□□□□ -0.82
SKA1-204ENST00000488454 IKZF3Q9UKT9 509 aa9.96□□□□□ -0.82
SKA1-204ENST00000488454 ATXN7L1Q9ULK2 861 aaPredicted RBP9.96□□□□□ -0.82
SKA1-204ENST00000488454 TMCO1Q9UM00 188 aa9.96□□□□□ -0.82
SKA1-204ENST00000488454 ASCC3Q8N3C0 2202 aaKnown RBP9.96□□□□□ -0.82
SKA1-204ENST00000488454 WDR87Q6ZQQ6 2873 aa9.96□□□□□ -0.82
SKA1-204ENST00000488454 A0A1W2PQM1 296 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 TTLL8A6PVC2 850 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 NTN3O00634 580 aaPredicted RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 TERTO14746 1132 aaKnown RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 RASSF9O75901 435 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 GFAPP14136 432 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 JUPP14923 745 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 CDH3P22223 829 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 CCND1P24385 295 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 IMPA1P29218 277 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 OAS2P29728 719 aaKnown RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 PRDX3P30048 256 aaKnown RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 SCTRP47872 440 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 ID4P47928 161 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 ARL4DP49703 201 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 INSM1Q01101 510 aaPredicted RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 SLC18A2Q05940 514 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 NAE1Q13564 534 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 PPP1R3AQ16821 1122 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 CCDC153Q494R4 210 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 SNAP47Q5SQN1 464 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 N4BP2L1Q5TBK1 243 aaPredicted RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 CAPN13Q6MZZ7 669 aaPredicted RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 AGTRAPQ6RW13 159 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 FAM92BQ6ZTR7 304 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 CLEC14AQ86T13 490 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 TAX1BP1Q86VP1 789 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 ADGRF3Q8IZF5 1079 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 OR4D9Q8NGE8 314 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 HMGCLL1Q8TB92 370 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 DENND1AQ8TEH3 1009 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 ZNF480Q8WV37 535 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 TMEM74Q96NL1 305 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 GPR78Q96P69 363 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 CD180Q99467 661 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 NUDT22Q9BRQ3 303 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 MENTQ9BUN1 341 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 PCBD2Q9H0N5 130 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 ATG10Q9H0Y0 220 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 ZNF395Q9H8N7 513 aaPredicted RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 TMBIM4Q9HC24 238 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 CCDC177Q9NQR7 707 aaPredicted RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 INTS7Q9NVH2 962 aaKnown RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 ZNF358Q9NW07 568 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 WWOXQ9NZC7 414 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 NUDT4Q9NZJ9 180 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 OGFRQ9NZT2 677 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 AKAP7Q9P0M2 348 aaPredicted RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 CPSF2Q9P2I0 782 aaKnown RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 KLHL3Q9UH77 587 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 ARHGEF17Q96PE2 2063 aaPredicted RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 ARID1BQ8NFD5 2236 aaPredicted RBP9.95□□□□□ -0.82
SKA1-204ENST00000488454 GVINP1Q7Z2Y8 2422 aa9.95□□□□□ -0.82
SKA1-204ENST00000488454 COL5A1P20908 1838 aaPredicted RBP9.94□□□□□ -0.82
SKA1-204ENST00000488454 KRT87PA6NCN2 255 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 A8MU76 341 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 E7ENX8 843 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 UBXN8O00124 270 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 MAP2K7O14733 419 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 SPAG7O75391 227 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 CCNDBP1O95273 360 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 TOP3BO95985 862 aaKnown RBP9.94□□□□□ -0.82
SKA1-204ENST00000488454 MT-CO3P00414 261 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 ERGP11308 486 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 MPSTP25325 297 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 CMPK1P30085 196 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 KCNC1P48547 511 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 INHBCP55103 352 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 TAP2Q03519 686 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 TRA2AQ13595 282 aaKnown RBP eCLIP9.94□□□□□ -0.82
SKA1-204ENST00000488454 FASTKQ14296 549 aaKnown RBP9.94□□□□□ -0.82
SKA1-204ENST00000488454 NAA25Q14CX7 972 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 PFKFB4Q16877 469 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 TECRLQ5HYJ1 363 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 PHF19Q5T6S3 580 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 LCE2AQ5TA79 106 aaPredicted RBP9.94□□□□□ -0.82
SKA1-204ENST00000488454 CACHD1Q5VU97 1274 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 C16orf46Q6P387 395 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 SUSD1Q6UWL2 747 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 MBOAT1Q6ZNC8 495 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 SH2D5Q6ZV89 423 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 RAB44Q7Z6P3 723 aaPredicted RBP9.94□□□□□ -0.82
SKA1-204ENST00000488454 EXOC3L1Q86VI1 746 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 TMPRSS12Q86WS5 348 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 GALNT15Q8N3T1 639 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 FBXO39Q8N4B4 442 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 BANPQ8N9N5 519 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 LINC01555Q8NAE3 123 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 PPFIBP2Q8ND30 876 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 RHBDF1Q96CC6 855 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 GRAMD1AQ96CP6 724 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 DEPDC7Q96QD5 511 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 ATOH8Q96SQ7 321 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms