RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 UGT2B7P16662 529 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 CSTF2P33240 577 aaKnown RBP eCLIP12.46□□□□□ -0.41
SSR4-211ENST00000486204 PHBP35232 272 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 TSPAN7P41732 249 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 RGS4P49798 205 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 SEPHS1P49903 392 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 POLE2P56282 527 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 ILF2Q12905 390 aaKnown RBP12.46□□□□□ -0.41
SSR4-211ENST00000486204 PRKAA1Q13131 559 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 PDAP1Q13442 181 aaKnown RBP12.46□□□□□ -0.41
SSR4-211ENST00000486204 SLMAPQ14BN4 828 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 ZKSCAN8Q15776 578 aaPredicted RBP12.46□□□□□ -0.41
SSR4-211ENST00000486204 ATCAYQ86WG3 371 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 ZFAND4Q86XD8 727 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 ANKRD49Q8WVL7 239 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 UBXN4Q92575 508 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 RAB11FIP5Q9BXF6 653 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 EPB41L4BQ9H329 900 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 CAB39LQ9H9S4 337 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 POPDC3Q9HBV1 291 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 SPATA7Q9P0W8 599 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 TUBD1Q9UJT1 453 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 IKZF3Q9UKT9 509 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 BTRCQ9Y297 605 aa12.46□□□□□ -0.41
SSR4-211ENST00000486204 ANKRD17O75179 2603 aaKnown RBP12.46□□□□□ -0.42
SSR4-211ENST00000486204 SEC16AO15027 2179 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 A0A1W2PPV9 198 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 EFCAB7A8K855 629 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 ABHD2P08910 425 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 PVRP15151 417 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 ST6GAL1P15907 406 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 NELFEP18615 380 aaKnown RBP12.45□□□□□ -0.42
SSR4-211ENST00000486204 SAT1P21673 171 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 MAPK10P53779 464 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 IL2P60568 153 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 SH3BP2P78314 561 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 MC2RQ01718 297 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 POU4F1Q01851 419 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 SP140Q13342 867 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 KIR2DS3Q14952 304 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 CYP2A13Q16696 494 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 PHKG1Q16816 387 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 GRTP1Q5TC63 336 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 ARMC6Q6NXE6 501 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 TTC23LQ6PF05 361 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 SPESP1Q6UW49 350 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 SBSNQ6UWP8 590 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 UBE2R2Q712K3 238 aaPredicted RBP12.45□□□□□ -0.42
SSR4-211ENST00000486204 TRIM73Q86UV7 250 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 FAM129CQ86XR2 697 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 KMT5CQ86Y97 462 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 MYO1HQ8N1T3 1032 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 OR9A1PQ8NGU1 263 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 MAGEC3Q8TD91 643 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 MIB2Q96AX9 1013 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 PDLIM5Q96HC4 596 aaKnown RBP12.45□□□□□ -0.42
SSR4-211ENST00000486204 CYTH2Q99418 400 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 PKP4Q99569 1192 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 APMAPQ9HDC9 416 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 C1GALT1Q9NS00 363 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 FOXJ2Q9P0K8 574 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 AKAP7Q9P0M2 348 aaPredicted RBP12.45□□□□□ -0.42
SSR4-211ENST00000486204 TXNDC16Q9P2K2 825 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 SLC39A10Q9ULF5 831 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 PCDHGA3Q9Y5H0 932 aa12.45□□□□□ -0.42
SSR4-211ENST00000486204 SLC9B1P1A6NJY1 282 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 PHGDHO43175 533 aaKnown RBP12.44□□□□□ -0.42
SSR4-211ENST00000486204 RIPK2O43353 540 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 PRAMEF10O60809 474 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 ZBTB11O95625 1053 aaPredicted RBP12.44□□□□□ -0.42
SSR4-211ENST00000486204 SLC16A8O95907 504 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 C8GP07360 202 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 POU3F2P20265 443 aaPredicted RBP12.44□□□□□ -0.42
SSR4-211ENST00000486204 CDH3P22223 829 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 PSMB5P28074 263 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 SPRP35270 261 aaPredicted RBP12.44□□□□□ -0.42
SSR4-211ENST00000486204 FASTKQ14296 549 aaKnown RBP12.44□□□□□ -0.42
SSR4-211ENST00000486204 KCNAB1Q14722 419 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 PPP1R3AQ16821 1122 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 SLC5A12Q1EHB4 618 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 ANKS6Q68DC2 871 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 TRMT10CQ7L0Y3 403 aaKnown RBP12.44□□□□□ -0.42
SSR4-211ENST00000486204 TAX1BP1Q86VP1 789 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 DTX1Q86Y01 620 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 LRRC56Q8IYG6 542 aaPredicted RBP12.44□□□□□ -0.42
SSR4-211ENST00000486204 D2HGDHQ8N465 521 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 C2orf73Q8N5S3 287 aaPredicted RBP12.44□□□□□ -0.42
SSR4-211ENST00000486204 ZNF480Q8WV37 535 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 SLC44A1Q8WWI5 657 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 USP7Q93009 1102 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 TRAPPC9Q96Q05 1148 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 DDA1Q9BW61 102 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 SLC12A9Q9BXP2 914 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 B3GNT4Q9C0J1 378 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 GPAMQ9HCL2 828 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 ZNF71Q9NQZ8 489 aaPredicted RBP12.44□□□□□ -0.42
SSR4-211ENST00000486204 FBXO8Q9NRD0 319 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 PDE10AQ9Y233 779 aa12.44□□□□□ -0.42
SSR4-211ENST00000486204 A0A087WUV0 522 aaPredicted RBP12.43□□□□□ -0.42
SSR4-211ENST00000486204 A0A0J9YY10 115 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms