RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 RUVBL2Q9Y230 463 aaKnown RBP16.43■□□□□ 0.22
SMC4-216ENST00000485645 FITM1A5D6W6 292 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 H3BMM5 538 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 SEMA7AO75326 666 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 TPSB2P20231 275 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 ITGA3P26006 1051 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 ARNTP27540 789 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 PSMB5P28074 263 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 FMO4P31512 558 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 MRPL49Q13405 166 aaKnown RBP16.42■□□□□ 0.22
SMC4-216ENST00000485645 TPSAB1Q15661 275 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 CCSMST1Q4G0I0 132 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 CTSL3PQ5NE16 218 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 WASHC2DQ5SRD0 308 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 RNF187Q5TA31 235 aaPredicted RBP16.42■□□□□ 0.22
SMC4-216ENST00000485645 CNSTQ6PJW8 725 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 HMGCLL1Q8TB92 370 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.42■□□□□ 0.22
SMC4-216ENST00000485645 C19orf60Q96EN9 201 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 BIRC8Q96P09 236 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 ILKAPQ9H0C8 392 aaPredicted RBP16.42■□□□□ 0.22
SMC4-216ENST00000485645 CUEDC1Q9NWM3 386 aaPredicted RBP16.42■□□□□ 0.22
SMC4-216ENST00000485645 NXT1Q9UKK6 140 aaKnown RBP16.42■□□□□ 0.22
SMC4-216ENST00000485645 FAM169AQ9Y6X4 670 aa16.42■□□□□ 0.22
SMC4-216ENST00000485645 UTP20O75691 2785 aaKnown RBP16.41■□□□□ 0.22
SMC4-216ENST00000485645 GOLGA8KD6RF30 607 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 GOLGA8TH3BQL2 631 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 SOCS6O14544 535 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 CTSVO60911 334 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 VSX2P58304 361 aaPredicted RBP16.41■□□□□ 0.22
SMC4-216ENST00000485645 C4orf17Q53FE4 359 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 PRAMEF13Q5VWM6 474 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 ZNF662Q6ZS27 426 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 COX15Q7KZN9 410 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 CISD2Q8N5K1 135 aaKnown RBP16.41■□□□□ 0.22
SMC4-216ENST00000485645 OR2L3Q8NG85 312 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 PRR7Q8TB68 274 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 LPGAT1Q92604 370 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 VPS50Q96JG6 964 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 TCF12Q99081 682 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 SPSB2Q99619 263 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 SOX17Q9H6I2 414 aaPredicted RBP16.41■□□□□ 0.22
SMC4-216ENST00000485645 SLC6A20Q9NP91 592 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 HOMER3Q9NSC5 361 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 ASF1BQ9NVP2 202 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 SPATA7Q9P0W8 599 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 PLEKHB1Q9UF11 243 aaPredicted RBP16.41■□□□□ 0.22
SMC4-216ENST00000485645 FBXL4Q9UKA2 621 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 SOX13Q9UN79 622 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 KLK4Q9Y5K2 254 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 PCM1Q15154 2024 aa16.41■□□□□ 0.22
SMC4-216ENST00000485645 NUP210LQ5VU65 1888 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 A0A0J9YVX5 310 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 TCRBV7S3A2A0A539 114 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 HYKKA2RU49 373 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 KRT87PA6NCN2 255 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 CEP104O60308 925 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 NIPSNAP2O75323 286 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 ESR1P03372 595 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 CCDC175P0C221 793 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 CHRM3P20309 590 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 ATP5DP30049 168 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 OR1D4P47884 311 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 ADARP55265 1226 aaKnown RBP16.4■□□□□ 0.22
SMC4-216ENST00000485645 SARNPP82979 210 aaKnown RBP16.4■□□□□ 0.22
SMC4-216ENST00000485645 NAA25Q14CX7 972 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 TYSND1Q2T9J0 566 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 IRAK1BP1Q5VVH5 260 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 FRMPD2BQ6IN97 320 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 Q6ZS92 163 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 SHISA6Q6ZSJ9 500 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 METTL27Q8N6F8 245 aaPredicted RBP16.4■□□□□ 0.22
SMC4-216ENST00000485645 TRIM58Q8NG06 486 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 OR2A1Q8NGT9 310 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 ZBTB20Q9HC78 741 aaPredicted RBP16.4■□□□□ 0.22
SMC4-216ENST00000485645 CTSFQ9UBX1 484 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 ZC3H7BQ9UGR2 993 aaKnown RBP16.4■□□□□ 0.22
SMC4-216ENST00000485645 TSR3Q9UJK0 312 aaKnown RBP16.4■□□□□ 0.22
SMC4-216ENST00000485645 CRYL1Q9Y2S2 319 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 MAU2Q9Y6X3 613 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 HIVEP3Q5T1R4 2406 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 DOCK10Q96BY6 2186 aa16.4■□□□□ 0.22
SMC4-216ENST00000485645 A0A1W2PPV9 198 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 MATN4O95460 622 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 EIF2S1P05198 315 aaKnown RBP16.39■□□□□ 0.21
SMC4-216ENST00000485645 PAMP19021 973 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 OGNP20774 298 aaKnown RBP16.39■□□□□ 0.21
SMC4-216ENST00000485645 CMPK1P30085 196 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 GLRBP48167 497 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 TERF1P54274 439 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 FASTKQ14296 549 aaKnown RBP16.39■□□□□ 0.21
SMC4-216ENST00000485645 GBX1Q14549 363 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 NR6A1Q15406 480 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 TRIP13Q15645 432 aaPredicted RBP16.39■□□□□ 0.21
SMC4-216ENST00000485645 RBBP7Q16576 425 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 TUBB8Q3ZCM7 444 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 ANKRD20A4Q4UJ75 823 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 KIAA0930Q6ICG6 404 aaPredicted RBP16.39■□□□□ 0.21
SMC4-216ENST00000485645 KIRREL2Q6UWL6 708 aa16.39■□□□□ 0.21
SMC4-216ENST00000485645 RNF44Q7L0R7 432 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms