RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 WASHC2DQ5SRD0 308 aa18.41■□□□□ 0.54
COL27A1-205ENST00000485397 FRMPD2BQ6IN97 320 aa18.41■□□□□ 0.54
COL27A1-205ENST00000485397 TTC23LQ6PF05 361 aa18.41■□□□□ 0.54
COL27A1-205ENST00000485397 GSDMBQ8TAX9 411 aa18.41■□□□□ 0.54
COL27A1-205ENST00000485397 PANX3Q96QZ0 392 aa18.41■□□□□ 0.54
COL27A1-205ENST00000485397 BARD1Q99728 777 aaKnown RBP18.41■□□□□ 0.54
COL27A1-205ENST00000485397 MIPEPQ99797 713 aa18.41■□□□□ 0.54
COL27A1-205ENST00000485397 WDR77Q9BQA1 342 aaPredicted RBP18.41■□□□□ 0.54
COL27A1-205ENST00000485397 MESP1Q9BRJ9 268 aa18.41■□□□□ 0.54
COL27A1-205ENST00000485397 RAB11FIP5Q9BXF6 653 aa18.41■□□□□ 0.54
COL27A1-205ENST00000485397 STOX2Q9P2F5 926 aaPredicted RBP18.41■□□□□ 0.54
COL27A1-205ENST00000485397 GNPTGQ9UJJ9 305 aa18.41■□□□□ 0.54
COL27A1-205ENST00000485397 GUCA1BQ9UMX6 200 aa18.41■□□□□ 0.54
COL27A1-205ENST00000485397 A0A0J9YVX5 310 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 TARM1B6A8C7 271 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 NDUFS3O75489 264 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 RPS3P23396 243 aaKnown RBP eCLIP18.4■□□□□ 0.54
COL27A1-205ENST00000485397 YBX1P67809 324 aaKnown RBP18.4■□□□□ 0.54
COL27A1-205ENST00000485397 ELOAQ14241 798 aaKnown RBP18.4■□□□□ 0.54
COL27A1-205ENST00000485397 SIX1Q15475 284 aaPredicted RBP18.4■□□□□ 0.54
COL27A1-205ENST00000485397 RBBP7Q16576 425 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 KCTD19Q17RG1 926 aaPredicted RBP18.4■□□□□ 0.54
COL27A1-205ENST00000485397 ZNF787Q6DD87 383 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 OTOAQ7RTW8 1153 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 MAMDC2Q7Z304 686 aaPredicted RBP18.4■□□□□ 0.54
COL27A1-205ENST00000485397 GAS2L3Q86XJ1 694 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 SPC24Q8NBT2 197 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 ENAMQ9NRM1 1142 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 TSR3Q9UJK0 312 aaKnown RBP18.4■□□□□ 0.54
COL27A1-205ENST00000485397 NOVA2Q9UNW9 492 aaKnown RBP18.4■□□□□ 0.54
COL27A1-205ENST00000485397 SLC5A6Q9Y289 635 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 PCM1Q15154 2024 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 DOCK10Q96BY6 2186 aa18.4■□□□□ 0.54
COL27A1-205ENST00000485397 LOC105369274A0A096LPK9 316 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 LOC102723532A0A0G2JNH3 316 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 A0A1W2PPV9 198 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 VSTM2BA6NLU5 285 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 SRPX2O60687 465 aaPredicted RBP18.39■□□□□ 0.53
COL27A1-205ENST00000485397 FKBP9O95302 570 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 EIF3BP55884 814 aaKnown RBP18.39■□□□□ 0.53
COL27A1-205ENST00000485397 FASTKQ14296 549 aaKnown RBP18.39■□□□□ 0.53
COL27A1-205ENST00000485397 FAM214AQ32MH5 1076 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 TUBB8Q3ZCM7 444 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 CTSL3PQ5NE16 218 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 AGAP7PQ5VUJ5 663 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 CNSTQ6PJW8 725 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 IGFL2Q6UWQ7 119 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 CES3Q6UWW8 571 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 OR4N4Q8N0Y3 316 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 OR2L3Q8NG85 312 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 OR11G2Q8NGC1 345 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 DNAJB14Q8TBM8 379 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 PPP4R1Q8TF05 950 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 UBE2Q2Q8WVN8 375 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 C5orf34Q96MH7 638 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 AGAP4Q96P64 663 aa18.39■□□□□ 0.53
COL27A1-205ENST00000485397 MRM3Q9HC36 420 aaKnown RBP18.39■□□□□ 0.53
COL27A1-205ENST00000485397 EIF2B3Q9NR50 452 aaKnown RBP18.39■□□□□ 0.53
COL27A1-205ENST00000485397 ZC3H7BQ9UGR2 993 aaKnown RBP18.39■□□□□ 0.53
COL27A1-205ENST00000485397 NXT1Q9UKK6 140 aaKnown RBP18.39■□□□□ 0.53
COL27A1-205ENST00000485397 UNC79Q9P2D8 2635 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 NUP210LQ5VU65 1888 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 HYKKA2RU49 373 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 GOLGA8KD6RF30 607 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 GOLGA8TH3BQL2 631 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 EIF2S1P05198 315 aaKnown RBP18.38■□□□□ 0.53
COL27A1-205ENST00000485397 ARNTP27540 789 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 FMO4P31512 558 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 BASP1P80723 227 aaKnown RBP18.38■□□□□ 0.53
COL27A1-205ENST00000485397 Q0VFX4 171 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 CCNG2Q16589 344 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 IRAK1BP1Q5VVH5 260 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 LRRC6Q86X45 466 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 PRSS58Q8IYP2 241 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 MPP5Q8N3R9 675 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 RAB42Q8N4Z0 105 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 OTUD6BQ8N6M0 293 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 OR2A1Q8NGT9 310 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 HMGCLL1Q8TB92 370 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 MFSD3Q96ES6 412 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 THOC3Q96J01 351 aaKnown RBP18.38■□□□□ 0.53
COL27A1-205ENST00000485397 CNDP1Q96KN2 507 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 IL22Q9GZX6 179 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 LHPPQ9H008 270 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 ZNF304Q9HCX3 659 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 AGPAT4Q9NRZ5 378 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 SEMA3GQ9NS98 782 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 IL1RAPL1Q9NZN1 696 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 BFARQ9NZS9 450 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 KLK4Q9Y5K2 254 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 FAM169AQ9Y6X4 670 aa18.38■□□□□ 0.53
COL27A1-205ENST00000485397 CACNA1DQ01668 2161 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 KPNA5O15131 536 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 NIPSNAP2O75323 286 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 MGAT1P26572 445 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 NPY2RP49146 381 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 RPS6KA1Q15418 735 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 RNF44Q7L0R7 432 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 KCNMB4Q86W47 210 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 ST6GALNAC3Q8NDV1 305 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms