RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PGGT1BP53609 377 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 ABATP80404 500 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 RELAQ04206 551 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 ABHD18Q0P651 414 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 GPR19Q15760 415 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 PPP1R3AQ16821 1122 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 KIAA1614Q5VZ46 1190 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 PWWP2BQ6NUJ5 590 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 FIGLAQ6QHK4 219 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 SBSNQ6UWP8 590 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 TRMT10CQ7L0Y3 403 aaKnown RBP17.11■□□□□ 0.33
SREBF1-213ENST00000485080 TIPARPQ7Z3E1 657 aaKnown RBP17.11■□□□□ 0.33
SREBF1-213ENST00000485080 CCDC91Q7Z6B0 441 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 NLGN4XQ8N0W4 816 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 ESX1Q8N693 406 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 NLGN4YQ8NFZ3 816 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-213ENST00000485080 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.11■□□□□ 0.336e-11■■■■■ 72.2
SREBF1-213ENST00000485080 HIST1H2AHQ96KK5 128 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 UBXN10Q96LJ8 280 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 LRFN5Q96NI6 719 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 HIST1H2AJQ99878 128 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 H2AFJQ9BTM1 129 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 TRIM54Q9BYV2 358 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 TXLNGYQ9BZA5 131 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 ULBP3Q9BZM4 244 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 PCBD2Q9H0N5 130 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 GPAMQ9HCL2 828 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-213ENST00000485080 STOX2Q9P2F5 926 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-213ENST00000485080 ANKMY1Q9P2S6 941 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 SERTAD3Q9UJW9 196 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 CCNDBP1O95273 360 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 TIAF1O95411 115 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 ZNF28P17035 718 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 MAGP20916 626 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 SAT1P21673 171 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 CRABP2P29373 138 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 SLC26A3P40879 764 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 CSRP3P50461 194 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 ITGA1P56199 1179 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 RAB10P61026 200 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 CDKL1Q00532 357 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 PRDX1Q06830 199 aaKnown RBP17.1■□□□□ 0.33
SREBF1-213ENST00000485080 ZNF460Q14592 562 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 TGIF1Q15583 401 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 PHKG1Q16816 387 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 BROXQ5VW32 411 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 FCRL6Q6DN72 434 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 TAX1BP1Q86VP1 789 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 SYTL1Q8IYJ3 562 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 CACNA2D3Q8IZS8 1091 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 OR1L3Q8NH93 324 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 ANKRD49Q8WVL7 239 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 SLC44A1Q8WWI5 657 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 NAF1Q96HR8 494 aaKnown RBP17.1■□□□□ 0.33
SREBF1-213ENST00000485080 ZNF285Q96NJ3 590 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 CCNL2Q96S94 520 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-213ENST00000485080 FAM117AQ9C073 453 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 PLCL2Q9UPR0 1127 aa17.1■□□□□ 0.33
SREBF1-213ENST00000485080 HMX2A2RU54 273 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 FAM155BO75949 473 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 KIAA0754O94854 1291 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 ACSL3O95573 720 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 SYF2O95926 243 aaKnown RBP17.09■□□□□ 0.33
SREBF1-213ENST00000485080 CCND1P24385 295 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 CMPK1P30085 196 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 RPA3P35244 121 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-213ENST00000485080 EFTUD2Q15029 972 aaKnown RBP eCLIP17.09■□□□□ 0.339e-8■■■■□ 21.6
SREBF1-213ENST00000485080 ZC3H12BQ5HYM0 836 aaKnown RBP17.09■□□□□ 0.33
SREBF1-213ENST00000485080 UBAP2Q5T6F2 1119 aaKnown RBP17.09■□□□□ 0.33
SREBF1-213ENST00000485080 ICE2Q659A1 982 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 AGTRAPQ6RW13 159 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 C6orf15Q6UXA7 325 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-213ENST00000485080 ADAMTSL2Q86TH1 951 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 FAM20CQ8IXL6 584 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 ATL1Q8WXF7 558 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 FBXL8Q96CD0 374 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 SGPP1Q9BX95 441 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 KLHL25Q9H0H3 589 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 CAB39LQ9H9S4 337 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 AP1M2Q9Y6Q5 423 aa17.09■□□□□ 0.33
SREBF1-213ENST00000485080 A0A087WUV0 522 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-213ENST00000485080 OR2A25A4D2G3 310 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 TMEM150CB9EJG8 249 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 CPNE3O75131 537 aaKnown RBP17.08■□□□□ 0.32
SREBF1-213ENST00000485080 SCRG1O75711 98 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 HBQ1P09105 142 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 HRH2P25021 359 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 PSMB5P28074 263 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 STAT5AP42229 794 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 TMPRSS3P57727 454 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 ATP6V0D1P61421 351 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 CDKL4Q5MAI5 379 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 ZNF425Q6IV72 752 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 SUSD1Q6UWL2 747 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 ZNF517Q6ZMY9 492 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-213ENST00000485080 CNPY4Q8N129 248 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 OR56A3Q8NH54 315 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 MIPEPQ99797 713 aa17.08■□□□□ 0.32
SREBF1-213ENST00000485080 PRORYQ9H606 182 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms