RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 A0A0J9YVX5 310 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 HYKKA2RU49 373 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 GOLGA8KD6RF30 607 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 GOLGA8TH3BQL2 631 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 EIF2S1P05198 315 aaKnown RBP19.3■□□□□ 0.68
ACTB-212ENST00000484841 OGNP20774 298 aaKnown RBP19.3■□□□□ 0.68
ACTB-212ENST00000484841 MCM3P25205 808 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 GLRBP48167 497 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 VPS41P49754 854 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 SOX8P57073 446 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 FOXL2P58012 376 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 OCA2Q04671 838 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 TSTA3Q13630 321 aaPredicted RBP19.3■□□□□ 0.68
ACTB-212ENST00000484841 TRIP13Q15645 432 aaPredicted RBP19.3■□□□□ 0.68
ACTB-212ENST00000484841 RBBP7Q16576 425 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 NKG7Q16617 165 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 ANKRD20A4Q4UJ75 823 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 CTSL3PQ5NE16 218 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 WASHC2DQ5SRD0 308 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 IGFL3Q6UXB1 125 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 ZNF662Q6ZS27 426 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 METTL27Q8N6F8 245 aaPredicted RBP19.3■□□□□ 0.68
ACTB-212ENST00000484841 OR2L3Q8NG85 312 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 HMGCLL1Q8TB92 370 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 FAM136AQ96C01 138 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 CCDC68Q9H2F9 335 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 SOX17Q9H6I2 414 aaPredicted RBP19.3■□□□□ 0.68
ACTB-212ENST00000484841 ZNF552Q9H707 407 aaPredicted RBP19.3■□□□□ 0.68
ACTB-212ENST00000484841 FAM114A2Q9NRY5 505 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 SLC22A11Q9NSA0 550 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 CUEDC1Q9NWM3 386 aaPredicted RBP19.3■□□□□ 0.68
ACTB-212ENST00000484841 UTP6Q9NYH9 597 aaKnown RBP19.3■□□□□ 0.68
ACTB-212ENST00000484841 ZC3H7BQ9UGR2 993 aaKnown RBP19.3■□□□□ 0.68
ACTB-212ENST00000484841 FBXL4Q9UKA2 621 aa19.3■□□□□ 0.68
ACTB-212ENST00000484841 RUVBL2Q9Y230 463 aaKnown RBP19.3■□□□□ 0.68
ACTB-212ENST00000484841 NIPSNAP2O75323 286 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 VPS26AO75436 327 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 PSMB5P28074 263 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 ATP5DP30049 168 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 CXCR5P32302 372 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 RPA3P35244 121 aaPredicted RBP19.29■□□□□ 0.68
ACTB-212ENST00000484841 OR1D4P47884 311 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 GPS1Q13098 491 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 EIF2S3LQ2VIR3 472 aaKnown RBP19.29■□□□□ 0.68
ACTB-212ENST00000484841 TTLL9Q3SXZ7 439 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 CCSMST1Q4G0I0 132 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 C4orf17Q53FE4 359 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 PRAMEF13Q5VWM6 474 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 ARMC3Q5W041 872 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 CISD2Q8N5K1 135 aaKnown RBP19.29■□□□□ 0.68
ACTB-212ENST00000484841 LPGAT1Q92604 370 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 SNRNP40Q96DI7 357 aaKnown RBP19.29■□□□□ 0.68
ACTB-212ENST00000484841 SLC26A1Q9H2B4 701 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 ZNF304Q9HCX3 659 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 SEMA3GQ9NS98 782 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 COPG1Q9Y678 874 aaKnown RBP19.29■□□□□ 0.68
ACTB-212ENST00000484841 MAU2Q9Y6X3 613 aa19.29■□□□□ 0.68
ACTB-212ENST00000484841 CTAGE9A4FU28 777 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 ZNF839A8K0R7 811 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 PRICKLE3O43900 615 aaPredicted RBP19.28■□□□□ 0.68
ACTB-212ENST00000484841 ONECUT2O95948 504 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 CATP04040 527 aaKnown RBP19.28■□□□□ 0.68
ACTB-212ENST00000484841 GCGRP47871 477 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 CARSP49589 748 aaKnown RBP19.28■□□□□ 0.68
ACTB-212ENST00000484841 ADARP55265 1226 aaKnown RBP19.28■□□□□ 0.68
ACTB-212ENST00000484841 MRPL49Q13405 166 aaKnown RBP19.28■□□□□ 0.68
ACTB-212ENST00000484841 THOC5Q13769 683 aaKnown RBP19.28■□□□□ 0.68
ACTB-212ENST00000484841 TYSND1Q2T9J0 566 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 MUM1Q2TAK8 710 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 TUBB8Q3ZCM7 444 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 AGAP7PQ5VUJ5 663 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 KIAA0930Q6ICG6 404 aaPredicted RBP19.28■□□□□ 0.68
ACTB-212ENST00000484841 PRMT9Q6P2P2 845 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 SHISA6Q6ZSJ9 500 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 OR2A1Q8NGT9 310 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 OR9A1PQ8NGU1 263 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.28■□□□□ 0.68
ACTB-212ENST00000484841 SMPDL3AQ92484 453 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 BIRC8Q96P09 236 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 AGAP4Q96P64 663 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 ZFYVE21Q9BQ24 234 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 ACAT2Q9BWD1 397 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 SLC6A20Q9NP91 592 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 HECTD1Q9ULT8 2610 aa19.28■□□□□ 0.68
ACTB-212ENST00000484841 SHANK1Q9Y566 2161 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 MAGEB16A2A368 324 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 FITM1A5D6W6 292 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 MASP2O00187 686 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 PRPF4O43172 522 aaKnown RBP eCLIP19.27■□□□□ 0.682e-11■■■□□ 17.4
ACTB-212ENST00000484841 CTSVO60911 334 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 CCNDBP1O95273 360 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 MATN4O95460 622 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 KRT14P02533 472 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 PKMP14618 531 aaKnown RBP19.27■□□□□ 0.68
ACTB-212ENST00000484841 HSD17B2P37059 387 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 DHX34Q14147 1143 aaKnown RBP19.27■□□□□ 0.68
ACTB-212ENST00000484841 NR6A1Q15406 480 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 KLHL38Q2WGJ6 581 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 NEPROQ6NW34 567 aa19.27■□□□□ 0.68
ACTB-212ENST00000484841 MIEF2Q96C03 454 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms