RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SLC22A2O15244 555 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 KLHL41O60662 606 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 GPC4O75487 556 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 RASSF9O75901 435 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 CHEK2O96017 543 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 ANXA6P08133 673 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 T-ENOLP0DO92 83 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 CKMT1AP12532 417 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 ENO3P13929 434 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 UGT1A6P19224 532 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 MSH3P20585 1137 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 UGT1A1P22309 533 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 UGT1A4P22310 534 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 ACP1P24666 158 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 HTR1BP28222 390 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 PRDX6P30041 224 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 UGT1A3P35503 534 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 UGT1A5P35504 534 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 TRIM23P36406 574 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 CLCN7P51798 805 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 DCDC1P59894 354 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 KCNJ2P63252 427 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 ELF3P78545 371 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 TIAL1Q01085 375 aaKnown RBP eCLIP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 PDCD2Q16342 344 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 KHDC1Q4VXA5 237 aaKnown RBP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 SLC9B1Q4ZJI4 515 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 C6orf163Q5TEZ5 329 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 VWA5B1Q5TIE3 1220 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 TMPRSS7Q7RTY8 843 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 TAF8Q7Z7C8 310 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 DCP2Q8IU60 420 aaKnown RBP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 NRSN1Q8IZ57 195 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 CLYBLQ8N0X4 340 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 LSMEM2Q8N112 164 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 ZBTB2Q8N680 514 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 TEX9Q8N6V9 391 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 PLPP7Q8NBV4 271 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 EEF1AKMT1Q8WVE0 214 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 CCDC74AQ96AQ1 378 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 RNF31Q96EP0 1072 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 PTCD3Q96EY7 689 aaKnown RBP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 CRELD1Q96HD1 420 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 TBC1D10AQ9BXI6 508 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 TEX101Q9BY14 249 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 TRIM54Q9BYV2 358 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 NUF2Q9BZD4 464 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 SHCBP1LQ9BZQ2 653 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 MMADHCQ9H3L0 296 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 GSTO2Q9H4Y5 243 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 ARL8BQ9NVJ2 186 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 KCTD5Q9NXV2 234 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 NFKBIL1Q9UBC1 381 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 SPASTQ9UBP0 616 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 ATXN7L1Q9ULK2 861 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 CNOT6Q9ULM6 557 aaKnown RBP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 DOLKQ9UPQ8 538 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 MED16Q9Y2X0 877 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 FIS1Q9Y3D6 152 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 TRAF6Q9Y4K3 522 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 APC2O95996 2303 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 SMG1Q96Q15 3661 aaKnown RBP6.75□□□□□ -1.33
BRCA1-216ENST00000484087 PKD1L2Q7Z442 2459 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 CACNA1BQ00975 2339 aa6.75□□□□□ -1.33
BRCA1-216ENST00000484087 ANKRD11Q6UB99 2663 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 A0A1W2PNU3 283 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 TRABD2BA6NFA1 517 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 IQCF5A8MTL0 148 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 LMO7DNF2Z398 122 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 CDC7O00311 574 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 GRID2O43424 1007 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 NOBOXO60393 691 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 AP2A2O94973 939 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 TNFP01375 233 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 FTH1P02794 183 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 KRT16P08779 473 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 CCNYL3P0C7X3 344 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 ALPPL2P10696 532 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 THRAP10827 490 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 ATP1B2P14415 290 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 ITGB6P18564 788 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 EPHA3P29320 983 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 EEF1DP29692 281 aaKnown RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 CCR10P46092 362 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 KCNC1P48547 511 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 PDX1P52945 283 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 IRX1P78414 480 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 CTBSQ01459 385 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 CLCQ05315 142 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 CYP4F3Q08477 520 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 CDC16Q13042 620 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 LCP2Q13094 533 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 TUBB3Q13509 450 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 UBAP2LQ14157 1087 aaKnown RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 MAPRE2Q15555 327 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 TGFBIQ15582 683 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 SNCBQ16143 134 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 LSM12Q3MHD2 195 aaKnown RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 ATP13A5Q4VNC0 1218 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 UNC50Q53HI1 259 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms