RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 TBPL1P62380 186 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 CTBSQ01459 385 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 NFATC4Q14934 902 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 TLR1Q15399 786 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 CYP2A13Q16696 494 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 ZNF423Q2M1K9 1284 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 SGO1Q5FBB7 561 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 XKR6Q5GH73 641 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 BNC2Q6ZN30 1099 aaPredicted RBP13.6□□□□□ -0.23
CLK3-204ENST00000483723 SYTL1Q8IYJ3 562 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 PCYOX1LQ8NBM8 494 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 HMGB4Q8WW32 186 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 MTFMTQ96DP5 389 aaKnown RBP13.6□□□□□ -0.23
CLK3-204ENST00000483723 SPDL1Q96EA4 605 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 CMTM7Q96FZ5 175 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 SERPINI1Q99574 410 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 GPATCH1Q9BRR8 931 aaKnown RBP13.6□□□□□ -0.23
CLK3-204ENST00000483723 PSMD13Q9UNM6 376 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 EIF3LQ9Y262 564 aaKnown RBP13.6□□□□□ -0.23
CLK3-204ENST00000483723 WDR37Q9Y2I8 494 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 NR5A2O00482 541 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 TOR1BO14657 336 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 TNFRSF10CO14798 259 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 SEMA4FO95754 770 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 LMNAP02545 664 aaKnown RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 ACP5P13686 325 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 HSD3B1P14060 373 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 ACPPP15309 386 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 FOSL2P15408 326 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 JAK1P23458 1154 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 HSD3B2P26439 372 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 NEK2P51955 445 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 POLR2JP52435 117 aaKnown RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 CLDN2P57739 230 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 STARD6P59095 220 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 YPEL5P62699 121 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 TFF2Q03403 129 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 CSTF3Q12996 717 aaKnown RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 LRRC32Q14392 662 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 IMPG1Q17R60 797 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 VPS26BQ4G0F5 336 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 USP39Q53GS9 565 aaKnown RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 C6orf163Q5TEZ5 329 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 ATG9BQ674R7 924 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 LCTLQ6UWM7 567 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 RIPOR1Q6ZS17 1223 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 HPS6Q86YV9 775 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 NEIL2Q969S2 332 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 METTL2AQ96IZ6 378 aaKnown RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 FCRL1Q96LA6 429 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 INSM2Q96T92 566 aaPredicted RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 TRIT1Q9H3H1 467 aaKnown RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 EBF2Q9HAK2 575 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 RNPEPL1Q9HAU8 725 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 FGF22Q9HCT0 170 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 MRPL40Q9NQ50 206 aaKnown RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 SPATA6Q9NWH7 488 aaPredicted RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 SPATA7Q9P0W8 599 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 WNT16Q9UBV4 365 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 CROTQ9UKG9 612 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 POMPQ9Y244 141 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 PLEKHM1Q9Y4G2 1056 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 PCDHGA11Q9Y5H2 935 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 PCM1Q15154 2024 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 PRSS38A1L453 326 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 SEC22BO75396 215 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 PDE5AO76074 875 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 SORBS2O94875 1100 aaKnown RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 SLC35G4P0C7Q5 338 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 C1GALT1C1LP0DN25 315 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 KCNK10P57789 538 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 RPL38P63173 70 aaKnown RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 PRKG2Q13237 762 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 CEACAM7Q14002 265 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 GAS6Q14393 721 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 C10orf62Q5T681 223 aaPredicted RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 GCNT7Q6ZNI0 430 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 LAS2Q8IYD9 372 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 MINDY1Q8N5J2 469 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 TMEM145Q8NBT3 493 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 WDR92Q96MX6 357 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 MYOCQ99972 504 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 HOPXQ9BPY8 73 aaPredicted RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 DCLRE1BQ9H816 532 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 BRF2Q9HAW0 419 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 CCDC177Q9NQR7 707 aaPredicted RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 CA14Q9ULX7 337 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 TMED5Q9Y3A6 229 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 TSC22D4Q9Y3Q8 395 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 DYRK1BQ9Y463 629 aa13.59□□□□□ -0.23
CLK3-204ENST00000483723 POLR3HQ9Y535 204 aaPredicted RBP13.59□□□□□ -0.23
CLK3-204ENST00000483723 ASPDHA6ND91 283 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 EEDO75530 441 aaKnown RBP13.58□□□□□ -0.24
CLK3-204ENST00000483723 IGHV4-34P06331 123 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 PRPS2P11908 318 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 IDSP22304 550 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 RPL10P27635 214 aaKnown RBP13.58□□□□□ -0.24
CLK3-204ENST00000483723 OXTRP30559 389 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 TMEM31Q5JXX7 168 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 TPRG1LQ5T0D9 272 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms