RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 PLCL2Q9UPR0 1127 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 SEC16AO15027 2179 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 NTRK1P04629 796 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 CCNYL3P0C7X3 344 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 PSMB5P28074 263 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 STX2P32856 288 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 RORAP35398 523 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 GRIA3P42263 894 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 RHDQ02161 417 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 NAA25Q14CX7 972 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 CRTC2Q53ET0 693 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-225ENST00000483506 FIGLAQ6QHK4 219 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 CEP128Q6ZU80 1094 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 ZSCAN1Q8NBB4 408 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 SLC38A9Q8NBW4 561 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 ANKRD7Q92527 254 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 ZNF285Q96NJ3 590 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 FAM117AQ9C073 453 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 PARVBQ9HBI1 364 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 POPDC3Q9HBV1 291 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-225ENST00000483506 PDE10AQ9Y233 779 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 PCDHGA6Q9Y5G7 932 aa17.31■□□□□ 0.36
HDAC6-225ENST00000483506 C21orf140B9A014 251 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 E7EQ34 232 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 PIAS1O75925 651 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 WISP3O95389 354 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-225ENST00000483506 CYP2A7P20853 494 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 IMPA1P29218 277 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 ECHS1P30084 290 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 GP5P40197 560 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 GCGRP47871 477 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 TAS2R39P59534 338 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 POU4F1Q01851 419 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 GPS2Q13227 327 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 NAB1Q13506 487 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 PRAMEF17Q5VTA0 474 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 TMEM207Q6UWW9 146 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 DSELQ8IZU8 1212 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 MCOLN3Q8TDD5 553 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 CCDC138Q96M89 665 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 UBL7Q96S82 380 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-225ENST00000483506 GPR22Q99680 433 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 RBBP8Q99708 897 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 MIPEPQ99797 713 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 TSPYL1Q9H0U9 437 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 ACTR5Q9H9F9 607 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-225ENST00000483506 WDR70Q9NW82 654 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 ANKMY1Q9P2S6 941 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 CROTQ9UKG9 612 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 KLHL20Q9Y2M5 609 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 AP1M2Q9Y6Q5 423 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 HEATR5BQ9P2D3 2071 aa17.3■□□□□ 0.36
HDAC6-225ENST00000483506 SMG1Q96Q15 3661 aaKnown RBP17.29■□□□□ 0.36
HDAC6-225ENST00000483506 OR2A25A4D2G3 310 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 ZNF891A8MT65 544 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-225ENST00000483506 OR2B3O76000 313 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 HBQ1P09105 142 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 F8A1P23610 371 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 CMPK1P30085 196 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 PGGT1BP53609 377 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 PHKG1Q16816 387 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 DEFB110Q30KQ9 67 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 KBTBD12Q3ZCT8 623 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 ZC3H12BQ5HYM0 836 aaKnown RBP17.29■□□□□ 0.36
HDAC6-225ENST00000483506 ZNF385CQ66K41 422 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-225ENST00000483506 TLDC1Q6P9B6 456 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 SUSD1Q6UWL2 747 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 GPR135Q8IZ08 494 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 NKAPQ8N5F7 415 aaKnown RBP17.29■□□□□ 0.36
HDAC6-225ENST00000483506 LSM14AQ8ND56 463 aaKnown RBP17.29■□□□□ 0.36
HDAC6-225ENST00000483506 TTC9Q92623 222 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 RNF31Q96EP0 1072 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 SLC6A20Q9NP91 592 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 PCMTD2Q9NV79 361 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 EURLQ9NYK6 297 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 STOX2Q9P2F5 926 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-225ENST00000483506 MTRF1LQ9UGC7 380 aaKnown RBP17.29■□□□□ 0.36
HDAC6-225ENST00000483506 IL17BQ9UHF5 180 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 KCND3Q9UK17 655 aa17.29■□□□□ 0.36
HDAC6-225ENST00000483506 NOVA2Q9UNW9 492 aaKnown RBP17.29■□□□□ 0.36
HDAC6-225ENST00000483506 FER1L5A0AVI2 2057 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 IGKV1-8A0A0C4DH67 115 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 ERVH48-1M5A8F1 160 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 MEN1O00255 615 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 ZSCAN9O15535 394 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-225ENST00000483506 ZNF749O43361 778 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 CTSVO60911 334 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 CCNDBP1O95273 360 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 SYF2O95926 243 aaKnown RBP17.28■□□□□ 0.36
HDAC6-225ENST00000483506 RECKO95980 971 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 ITGB2P05107 769 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 ENO2P09104 434 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-225ENST00000483506 RPA3P35244 121 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-225ENST00000483506 DLSTP36957 453 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 AP1S2P56377 157 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 ABATP80404 500 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 RELAQ04206 551 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 PRDX1Q06830 199 aaKnown RBP17.28■□□□□ 0.36
HDAC6-225ENST00000483506 ICE2Q659A1 982 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms