RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 ATP6V1B2P21281 511 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 GSK3BP49841 420 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 FGL2Q14314 439 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 FAM174BQ3ZCQ3 159 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 TMEM196Q5HYL7 178 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 CAPN13Q6MZZ7 669 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-225ENST00000483495 SLCO4C1Q6ZQN7 724 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 PDZD3Q86UT5 571 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 LRRTM4Q86VH4 590 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 AMZ2Q86W34 360 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 CACUL1Q86Y37 369 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 TP53I13Q8NBR0 393 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-225ENST00000483495 NUDT8Q8WV74 236 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 GTF2H4Q92759 462 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 SLCO4A1Q96BD0 722 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 APIPQ96GX9 242 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 HHIPQ96QV1 700 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 UHRF1Q96T88 793 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-225ENST00000483495 CGREF1Q99674 301 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 C1QTNF2Q9BXJ5 285 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 TRIM15Q9C019 465 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 MKRN2Q9H000 416 aaKnown RBP12.83□□□□□ -0.36
CPNE1-225ENST00000483495 ALG2Q9H553 416 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 ZNF576Q9H609 170 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 BRF2Q9HAW0 419 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 TRPV5Q9NQA5 729 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 MBNL1Q9NR56 388 aaKnown RBP12.83□□□□□ -0.36
CPNE1-225ENST00000483495 AP4S1Q9Y587 144 aa12.83□□□□□ -0.36
CPNE1-225ENST00000483495 PLRG1O43660 514 aaKnown RBP12.82□□□□□ -0.36
CPNE1-225ENST00000483495 RNASEH2AO75792 299 aaKnown RBP12.82□□□□□ -0.36
CPNE1-225ENST00000483495 PGRP06401 933 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 SDC1P18827 310 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 CLNS1AP54105 237 aaKnown RBP12.82□□□□□ -0.36
CPNE1-225ENST00000483495 PNLIPRP1P54315 467 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 TBPL1P62380 186 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 RPS21P63220 83 aaKnown RBP12.82□□□□□ -0.36
CPNE1-225ENST00000483495 LIPEQ05469 1076 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 IRF4Q15306 451 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 TMEM259Q4ZIN3 620 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 SPANXN4Q5MJ08 99 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 CYP2R1Q6VVX0 501 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 TICAM1Q8IUC6 712 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 KRTCAP2Q8N6L1 136 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 TMEM102Q8N9M5 508 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-225ENST00000483495 IL17RCQ8NAC3 791 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 OR8J3Q8NGG0 315 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 TESCQ96BS2 214 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 C11orf24Q96F05 449 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-225ENST00000483495 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 LRGUKQ96M69 825 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 PKP2Q99959 881 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 EHD1Q9H4M9 534 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 COPS7BQ9H9Q2 264 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-225ENST00000483495 SLC23A2Q9UGH3 650 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 CIDEBQ9UHD4 219 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 PCDHGA11Q9Y5H2 935 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 A0A1W2PQF6 199 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 ADAM23O75077 832 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 KCNH1O95259 989 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 NPPBP16860 134 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 HTR1EP28566 365 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 TAP2Q03519 686 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 INPP5AQ14642 412 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 STARD3Q14849 445 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 PLA2G4EQ3MJ16 856 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 SFT2D3Q587I9 215 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 C10orf62Q5T681 223 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-225ENST00000483495 METRNLQ641Q3 311 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 SDE2Q6IQ49 451 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 KIAA1161Q6NSJ0 714 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 RIMKLAQ8IXN7 391 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 SYTL1Q8IYJ3 562 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 PLCD3Q8N3E9 789 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 ADCY4Q8NFM4 1077 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 DNAJB8Q8NHS0 232 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 NEIL2Q969S2 332 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 KCTD14Q9BQ13 255 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-225ENST00000483495 TRIM8Q9BZR9 551 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 WDR26Q9H7D7 661 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 ARMC1Q9NVT9 282 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 FBXL12Q9NXK8 326 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 VPS29Q9UBQ0 182 aa12.82□□□□□ -0.36
CPNE1-225ENST00000483495 ARPC2O15144 300 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 KMOO15229 486 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 ERGP11308 486 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 TACR1P25103 407 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 GRIA3P42263 894 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 C21orf58P58505 322 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 MAPKAPK3Q16644 382 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 LRRC36Q1X8D7 754 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 ATG9BQ674R7 924 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 NOXRED1Q6NXP6 359 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 DOK6Q6PKX4 331 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 EP400NLQ6ZTU2 488 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 RALGPS2Q86X27 583 aaPredicted RBP12.81□□□□□ -0.36
CPNE1-225ENST00000483495 CATSPER1Q8NEC5 780 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
CPNE1-225ENST00000483495 OR7G3Q8NG95 312 aa12.81□□□□□ -0.36
CPNE1-225ENST00000483495 SETD7Q8WTS6 366 aaKnown RBP12.81□□□□□ -0.36
CPNE1-225ENST00000483495 APOLD1Q96LR9 279 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms