RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MRPL14Q6P1L8 145 aaKnown RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 FIGLAQ6QHK4 219 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 NAPRTQ6XQN6 538 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 TTLL10Q6ZVT0 673 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 RNF44Q7L0R7 432 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 GALNT7Q86SF2 657 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 MRGPREQ86SM8 312 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 TRIM73Q86UV7 250 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 CAND1Q86VP6 1230 aaKnown RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCM2-213ENST00000480658 OR2L3Q8NG85 312 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 LKAAEAR1Q8TD35 194 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 RERGQ96A58 199 aaPredicted RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 ZNF285Q96NJ3 590 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 ZFYVE21Q9BQ24 234 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 KLHL25Q9H0H3 589 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 SEMA3GQ9NS98 782 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 CUTCQ9NTM9 273 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 RNF14Q9UBS8 474 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 ASIC3Q9UHC3 531 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 CORO1CQ9ULV4 474 aaPredicted RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 SNX12Q9UMY4 172 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 VPS4AQ9UN37 437 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 CRYL1Q9Y2S2 319 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 PTRH2Q9Y3E5 179 aaKnown RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 MAD1L1Q9Y6D9 718 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 TLN1Q9Y490 2541 aaKnown RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 UBR5O95071 2799 aaPredicted RBP10.98□□□□□ -0.65
CCM2-213ENST00000480658 PIKFYVEQ9Y2I7 2098 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 TTLL8A6PVC2 850 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 AGPSO00116 658 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 CYC1P08574 325 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 TPBGLP0DKB5 382 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 MMP11P24347 488 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 OTX2P32243 289 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 CCL11P51671 97 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 SOX8P57073 446 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 OCA2Q04671 838 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 AIMP2Q13155 320 aaKnown RBP10.98□□□□□ -0.65
CCM2-213ENST00000480658 GRB7Q14451 532 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 KLHL38Q2WGJ6 581 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 SPANXN3Q5MJ09 141 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 DCAF10Q5QP82 559 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 PRAMEF17Q5VTA0 474 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 PDIK1LQ8N165 341 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 GPATCH11Q8N954 259 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 NAT8LQ8N9F0 302 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 INPP5DQ92835 1189 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 PNPLA2Q96AD5 504 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 LRRC39Q96DD0 335 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 SMAD5Q99717 465 aaKnown RBP10.98□□□□□ -0.65
CCM2-213ENST00000480658 TRIM4Q9C037 500 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 AKIRIN1Q9H9L7 192 aaPredicted RBP10.98□□□□□ -0.65
CCM2-213ENST00000480658 MRPS30Q9NP92 439 aaKnown RBP10.98□□□□□ -0.65
CCM2-213ENST00000480658 ATP13A2Q9NQ11 1180 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 C20orf96Q9NUD7 363 aaPredicted RBP10.98□□□□□ -0.65
CCM2-213ENST00000480658 TAS2R13Q9NYV9 303 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 DHCR7Q9UBM7 475 aaKnown RBP10.98□□□□□ -0.65
CCM2-213ENST00000480658 PCYOX1Q9UHG3 505 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 NEU2Q9Y3R4 380 aa10.98□□□□□ -0.65
CCM2-213ENST00000480658 ZCWPW2A0A1B0GU75 182 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 TCRBV7S3A2A0A539 114 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 GOLGA8KD6RF30 607 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 GOLGA8TH3BQL2 631 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 CCDC188H7C350 402 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 PRICKLE3O43900 615 aaPredicted RBP10.97□□□□□ -0.65
CCM2-213ENST00000480658 NIPSNAP2O75323 286 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 AVILO75366 819 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 C8GP07360 202 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 FDXRP22570 491 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 GRIA3P42263 894 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 BDKRB1P46663 353 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 CLCN7P51798 805 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 PNLIPRP1P54315 467 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 SKP1P63208 163 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 ATP1A4Q13733 1029 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 MYBPC3Q14896 1274 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 MORF4L2Q15014 288 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 NDUFA9Q16795 377 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 C1orf189Q5VU69 101 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 CPZQ66K79 652 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 TTC27Q6P3X3 843 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 IGFL3Q6UXB1 125 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 CENPUQ71F23 418 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 OVCH1Q7RTY7 1134 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 TAX1BP1Q86VP1 789 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 KCNMB4Q86W47 210 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 GALNT16Q8N428 558 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 GALNT11Q8NCW6 608 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 OR2A1Q8NGT9 310 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 RUFY1Q96T51 708 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 TRIM55Q9BYV6 548 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 SPRTNQ9H040 489 aaPredicted RBP10.97□□□□□ -0.65
CCM2-213ENST00000480658 SLAMF7Q9NQ25 335 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 C14orf105Q9NVL8 296 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 ZNF282Q9UDV7 671 aaPredicted RBP10.97□□□□□ -0.65
CCM2-213ENST00000480658 TRMT6Q9UJA5 497 aaKnown RBP10.97□□□□□ -0.65
CCM2-213ENST00000480658 BSNQ9UPA5 3926 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 TENM4Q6N022 2769 aa10.97□□□□□ -0.65
CCM2-213ENST00000480658 HYKKA2RU49 373 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms