RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 GRIA3P42263 894 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 SLC12A2P55011 1212 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 CDKL1Q00532 357 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 KCNAB1Q14722 419 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 ZIC1Q15915 447 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 CDKL4Q5MAI5 379 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 PWWP2BQ6NUJ5 590 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 TLDC1Q6P9B6 456 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 INO80CQ6PI98 192 aaPredicted RBP14.89□□□□□ -0.03
C9orf3-217ENST00000479161 FIGLAQ6QHK4 219 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 TMEM207Q6UWW9 146 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 C6orf15Q6UXA7 325 aaPredicted RBP14.89□□□□□ -0.03
C9orf3-217ENST00000479161 CAPN12Q6ZSI9 719 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 TIPARPQ7Z3E1 657 aaKnown RBP14.89□□□□□ -0.03
C9orf3-217ENST00000479161 CTAGE3PQ8IX95 158 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 CACNA2D3Q8IZS8 1091 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 ATL1Q8WXF7 558 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 HIST1H2AHQ96KK5 128 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 ZNF285Q96NJ3 590 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 HIST1H2AJQ99878 128 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 DPH2Q9BQC3 489 aaPredicted RBP14.89□□□□□ -0.03
C9orf3-217ENST00000479161 H2AFJQ9BTM1 129 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 DERL2Q9GZP9 239 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 GPAMQ9HCL2 828 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 FAM60AQ9NP50 221 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 NINJ2Q9NZG7 142 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 PLCL2Q9UPR0 1127 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 BAHCC1Q9P281 2608 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 MGAQ8IWI9 3026 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 LOC400499M0QZD8 3231 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 OR2A25A4D2G3 310 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 CPNE3O75131 537 aaKnown RBP14.88□□□□□ -0.03
C9orf3-217ENST00000479161 ABHD2P08910 425 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 PVRP15151 417 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 STMN1P16949 149 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 MAGP20916 626 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 CMPK1P30085 196 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 STAT5AP42229 794 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 ITGA1P56199 1179 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 VAC14Q08AM6 782 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 GPR19Q15760 415 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 MANEAQ5SRI9 462 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 YOD1Q5VVQ6 348 aaPredicted RBP14.88□□□□□ -0.03
C9orf3-217ENST00000479161 FBXO38Q6PIJ6 1188 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 SBSNQ6UWP8 590 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 TRMT10CQ7L0Y3 403 aaKnown RBP14.88□□□□□ -0.03
C9orf3-217ENST00000479161 ADAMTSL2Q86TH1 951 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 CEP97Q8IW35 865 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 GPR135Q8IZ08 494 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 IL22RA1Q8N6P7 574 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 PPM1NQ8N819 430 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 UBXN10Q96LJ8 280 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 CDC42EP4Q9H3Q1 356 aaKnown RBP14.88□□□□□ -0.03
C9orf3-217ENST00000479161 STOX2Q9P2F5 926 aaPredicted RBP14.88□□□□□ -0.03
C9orf3-217ENST00000479161 ADAMTS6Q9UKP5 1117 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 PADI1Q9ULC6 663 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 MTO1Q9Y2Z2 717 aaKnown RBP14.88□□□□□ -0.03
C9orf3-217ENST00000479161 PCDHGA6Q9Y5G7 932 aa14.88□□□□□ -0.03
C9orf3-217ENST00000479161 C21orf140B9A014 251 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 E7EQ34 232 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 AGRPO00253 132 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 SCRG1O75711 98 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 KIAA0754O94854 1291 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 CCNYL3P0C7X3 344 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 ZNF28P17035 718 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 TNFRSF8P28908 595 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 CRABP2P29373 138 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 RPA3P35244 121 aaPredicted RBP14.87□□□□□ -0.03
C9orf3-217ENST00000479161 HNMTP50135 292 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 CSRP3P50461 194 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 EMP3P54852 163 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 RAB10P61026 200 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 ATP6V0D1P61421 351 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 FASTKQ14296 549 aaKnown RBP14.87□□□□□ -0.03
C9orf3-217ENST00000479161 USP10Q14694 798 aaKnown RBP14.87□□□□□ -0.03
C9orf3-217ENST00000479161 TGIF1Q15583 401 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 PPP1R3AQ16821 1122 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 TCTE1Q5JU00 501 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 KIAA1614Q5VZ46 1190 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 ICE2Q659A1 982 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 FCRL6Q6DN72 434 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 ZNF425Q6IV72 752 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 CCDC81Q6ZN84 652 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 TRIM73Q86UV7 250 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 SYTL1Q8IYJ3 562 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 OR1L3Q8NH93 324 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 HNRNPLLQ8WVV9 542 aaKnown RBP14.87□□□□□ -0.03
C9orf3-217ENST00000479161 FBXL8Q96CD0 374 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 NAF1Q96HR8 494 aaKnown RBP14.87□□□□□ -0.03
C9orf3-217ENST00000479161 SLC45A3Q96JT2 553 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 SGPP1Q9BX95 441 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 SNX7Q9UNH6 387 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 SRPK3Q9UPE1 567 aa14.87□□□□□ -0.03
C9orf3-217ENST00000479161 ATRXP46100 2492 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 TEX51A0A1B0GUA7 166 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 PABPN1LA6NDY0 278 aaKnown RBP14.86□□□□□ -0.03
C9orf3-217ENST00000479161 ESPNB1AK53 854 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 TMEM150CB9EJG8 249 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 TERTO14746 1132 aaKnown RBP14.86□□□□□ -0.03
C9orf3-217ENST00000479161 EFSO43281 561 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms