RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 H0YIV9 168 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 PLOD2O00469 737 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 TRPC1P48995 793 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 ALDH3A2P51648 485 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 SEMG2Q02383 582 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 CHRNB3Q05901 458 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 EPS8Q12929 822 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 ZNF284Q2VY69 593 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 BCL7AQ4VC05 210 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 ARSIQ5FYB1 569 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 C10orf62Q5T681 223 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-212ENST00000477970 GRHL2Q6ISB3 625 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 RBM44Q6ZP01 1051 aaKnown RBP11.87□□□□□ -0.51
PTPRF-212ENST00000477970 TMEM132CQ8N3T6 1108 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 SVOPLQ8N434 492 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 FAM47BQ8NA70 645 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 GRIP2Q9C0E4 1043 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 LMAN2LQ9H0V9 348 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 ZFP14Q9HCL3 533 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 SPATA6Q9NWH7 488 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-212ENST00000477970 DPP7Q9UHL4 492 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 AK5Q9Y6K8 562 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 TTC34A8MYJ7 566 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 ZNF701M0R085 212 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-212ENST00000477970 PDLIM1O00151 329 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 EI24O14681 340 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 SDC1P18827 310 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 HNF4AP41235 474 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 GRIN2CQ14957 1233 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 CPSF6Q16630 551 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTPRF-212ENST00000477970 AAK1Q2M2I8 961 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 B3GNT6Q6ZMB0 384 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 Q7L0L9 218 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 SLC22A15Q8IZD6 547 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 DHRSXQ8N5I4 330 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 GLYATL1Q969I3 302 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 C11orf24Q96F05 449 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-212ENST00000477970 REXO5Q96IC2 774 aaKnown RBP11.87□□□□□ -0.51
PTPRF-212ENST00000477970 DNAJB9Q9UBS3 223 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-212ENST00000477970 DLGAP4Q9Y2H0 992 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 AP1M2Q9Y6Q5 423 aa11.87□□□□□ -0.51
PTPRF-212ENST00000477970 PER2O15055 1255 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 BNIP3LO60238 219 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 ATG13O75143 517 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 PRPS1L1P21108 318 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 S100A3P33764 101 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 ABHD18Q0P651 414 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 PLA2G4EQ3MJ16 856 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 ERAP2Q6P179 960 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 ABRAXAS1Q6UWZ7 409 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 SERPINA13PQ6UXR4 307 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 KRTCAP2Q8N6L1 136 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 CELF5Q8N6W0 485 aaKnown RBP11.86□□□□□ -0.51
PTPRF-212ENST00000477970 OR56A3Q8NH54 315 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 POF1BQ8WVV4 589 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 COQ10AQ96MF6 247 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 RNF145Q96MT1 663 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 CCM2Q9BSQ5 444 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 DCAF13Q9NV06 445 aaKnown RBP11.86□□□□□ -0.51
PTPRF-212ENST00000477970 SIRT5Q9NXA8 310 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 CD84Q9UIB8 345 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 CEPT1Q9Y6K0 416 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 CXCR6O00574 342 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 PRAMEF4O60810 478 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 RFPL2O75678 378 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 OR6B1O95007 311 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 ETV3P41162 512 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 PHC1P78364 1004 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 SRSF11Q05519 484 aaKnown RBP11.86□□□□□ -0.51
PTPRF-212ENST00000477970 CBX2Q14781 532 aaPredicted RBP11.86□□□□□ -0.51
PTPRF-212ENST00000477970 PRAMEF9Q5VWM5 478 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 LIPIQ6XZB0 460 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 Q6ZVL8 140 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 GPR155Q7Z3F1 870 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 SERPINA11Q86U17 422 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 EID3Q8N140 333 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 PNPT1Q8TCS8 783 aaKnown RBP11.86□□□□□ -0.51
PTPRF-212ENST00000477970 RIOK2Q9BVS4 552 aaKnown RBP11.86□□□□□ -0.51
PTPRF-212ENST00000477970 ABCG8Q9H221 673 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 PCDHB14Q9Y5E9 798 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 PCDHGA11Q9Y5H2 935 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 CTNNB1P35222 781 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 DAG1Q14118 895 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 DHCR24Q15392 516 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 THEMIS2Q5TEJ8 643 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 PDE12Q6L8Q7 609 aaKnown RBP11.86□□□□□ -0.51
PTPRF-212ENST00000477970 DET1Q7L5Y6 550 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 CAMKMTQ7Z624 323 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 CPA6Q8N4T0 437 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 TMIEQ8NEW7 156 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 PJA1Q8NG27 643 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 OR10A6Q8NH74 314 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 SCAMP4Q969E2 229 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 WDR34Q96EX3 536 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 SPATA9Q9BWV2 254 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 IKZF5Q9H5V7 419 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 SLC24A3Q9HC58 644 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 PPT2Q9UMR5 302 aa11.86□□□□□ -0.51
PTPRF-212ENST00000477970 SLC22A14Q9Y267 594 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms