RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-210	ENST00000477625	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
PTPN7-210	ENST00000477625	SEC16A	O15027	2179 aa		11.76	□□□□□ -0.53
PTPN7-210	ENST00000477625	HELZ2	Q9BYK8	2649 aa	Known RBP	11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	GCN1	Q92616	2671 aa	Known RBP	11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	SPTA1	P02549	2419 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	ZNF839	A8K0R7	811 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	EFCAB8	A8MWE9	144 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625		C9J4A7	227 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	GFY	I3L273	518 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	EIF3F	O00303	357 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	TP73	O15350	636 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	ZBTB14	O43829	449 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	SRPX2	O60687	465 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	AHSG	P02765	367 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	PSMB5	P28074	263 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	GABRB3	P28472	473 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	PMS2	P54278	862 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	ARL4C	P56559	192 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	DCD	P81605	110 aa	Known RBP	11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	IL10RA	Q13651	578 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	NCF4	Q15080	339 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	TEDDM1	Q5T9Z0	273 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	C1orf189	Q5VU69	101 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	FAM198B	Q6UWH4	519 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	SPNS2	Q8IVW8	549 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	APLF	Q8IW19	511 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	CPNE9	Q8IYJ1	553 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	SMPDL3A	Q92484	453 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	GBP5	Q96PP8	586 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	NDN	Q99608	321 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	DHRS4	Q9BTZ2	278 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	TRIM31	Q9BZY9	425 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	ENAM	Q9NRM1	1142 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	TXLNG	Q9NUQ3	528 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	TAS2R13	Q9NYV9	303 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	DHCR7	Q9UBM7	475 aa	Known RBP	11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	TRMT6	Q9UJA5	497 aa	Known RBP	11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	CHMP2B	Q9UQN3	213 aa		11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN7-210	ENST00000477625	SNRNP200	O75643	2136 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	NDC80	O14777	642 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	SUV39H1	O43463	412 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	CTSV	O60911	334 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	SLC16A8	O95907	504 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	CD63	P08962	238 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	ALAS2	P22557	587 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	MCM3	P25205	808 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	CMPK1	P30085	196 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	CASQ1	P31415	396 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	RPA3	P35244	121 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	GCGR	P47871	477 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	PNLIPRP1	P54315	467 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	ARSF	P54793	590 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	ETF1	P62495	437 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	YBX1	P67809	324 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	NFKB2	Q00653	900 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	FRG1	Q14331	258 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	NAA25	Q14CX7	972 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	NKAIN1	Q4KMZ8	207 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	TCTE1	Q5JU00	501 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	FAM69B	Q5VUD6	431 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	MLIP	Q5VWP3	458 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	LRRC8E	Q6NSJ5	796 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	SUSD1	Q6UWL2	747 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	GALNT7	Q86SF2	657 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	BBOF1	Q8ND07	529 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	SPATA4	Q8NEY3	305 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	ADAMTS17	Q8TE56	1095 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	ZNF480	Q8WV37	535 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	DLG3	Q92796	817 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	CFAP36	Q96G28	342 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	ZNF285	Q96NJ3	590 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	SELENOS	Q9BQE4	189 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	WDR83	Q9BRX9	315 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	ACAT2	Q9BWD1	397 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	IFT80	Q9P2H3	777 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	GPN3	Q9UHW5	284 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	TLK1	Q9UKI8	766 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	PADI2	Q9Y2J8	665 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	SNX24	Q9Y343	169 aa		11.74	□□□□□ -0.53
PTPN7-210	ENST00000477625	OR2A25	A4D2G3	310 aa		11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	FITM1	A5D6W6	292 aa		11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	FAM187A	A6NFU0	413 aa		11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625		E7ENX8	843 aa		11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	MKRN2OS	H3BPM6	223 aa		11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625		J3QKU1	62 aa		11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	SLC28A2	O43868	658 aa		11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	RFPL1	O75677	317 aa		11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	KLF7	O75840	302 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	SYF2	O95926	243 aa	Known RBP	11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	RPL21	P46778	160 aa	Known RBP	11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	RGS4	P49798	205 aa		11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	CDKN2D	P55273	166 aa		11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	MRPS25	P82663	173 aa	Known RBP	11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	TAP2	Q03519	686 aa		11.73	□□□□□ -0.53
PTPN7-210	ENST00000477625	PRDX1	Q06830	199 aa	Known RBP	11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms