RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 LDOC1O95751 146 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 NDUFB10O96000 172 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 IFNB1P01574 187 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 IFNA4P05014 189 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 HOXD4P09016 255 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 DUX4L2P0CJ85 424 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 DUX4L3P0CJ86 424 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 DUX4L4P0CJ87 422 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 DUX4L5P0CJ88 424 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 DUX4L6P0CJ89 424 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 DUX4L7P0CJ90 424 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 SNHG28P0DPA3 235 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 ITGAMP11215 1152 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 PDGFRAP16234 1089 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 TFEBP19484 476 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 ACO1P21399 889 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 ZP3P21754 424 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 CD72P21854 359 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 PCMT1P22061 227 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 FPR2P25090 351 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 PSMA2P25787 234 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 PTBP1P26599 531 aaKnown RBP eCLIP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 SPRP35270 261 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 RORAP35398 523 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 MAGEA3P43357 314 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 MAGEA12P43365 314 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 QARSP47897 775 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 SLC6A11P48066 632 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 MRPL19P49406 292 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 CENPAP49450 140 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 STARP49675 285 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 NKX2-5P52952 324 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 PKNOX1P55347 436 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 EEFSECP57772 596 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 RELQ04864 619 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 RGS1Q08116 209 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF543Q08ER8 600 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 SLC13A2Q13183 592 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 MAB21L1Q13394 359 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 SNTA1Q13424 505 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 AQP6Q13520 282 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 EFR3AQ14156 821 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 CCL15Q16663 113 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 TPRG1LQ5T0D9 272 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 ARMC4Q5T2S8 1044 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 MPP7Q5T2T1 576 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 LIPMQ5VYY2 423 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 HEATR6Q6AI08 1181 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 SLC9A4Q6AI14 798 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 TYW3Q6IPR3 259 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 LRRC8EQ6NSJ5 796 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 DARS2Q6PI48 645 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 RHOUQ7L0Q8 258 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 MON1BQ7L1V2 547 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 MAVSQ7Z434 540 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 R3HCC1LQ7Z5L2 792 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 SYVN1Q86TM6 617 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 DNAAF5Q86Y56 855 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 RASAL3Q86YV0 1011 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 FAM178BQ8IXR5 827 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 RDH10Q8IZV5 341 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 KLHL36Q8N4N3 616 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 TMIEQ8NEW7 156 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 DEPDC1BQ8WUY9 529 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 CANT1Q8WVQ1 401 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 HAS1Q92839 578 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 KAT5Q92993 513 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 SLC38A4Q969I6 547 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 HDAC10Q969S8 669 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 FAF2Q96CS3 445 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 ZC3HAV1LQ96H79 300 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 ART5Q96L15 291 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 CAPNS2Q96L46 248 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 PPP3R2Q96LZ3 170 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 GNRHR2Q96P88 292 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 ACCSQ96QU6 501 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 MMP19Q99542 508 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 CPNE1Q99829 537 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 DPYSL5Q9BPU6 564 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 RBM4BQ9BQ04 359 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 LXNQ9BS40 222 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 WACQ9BTA9 647 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 RBM4Q9BWF3 364 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF416Q9BWM5 594 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 TTLL2Q9BWV7 592 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 STRA6Q9BX79 667 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 TRIM54Q9BYV2 358 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 REXO4Q9GZR2 422 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 RACGAP1Q9H0H5 632 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 SPNS1Q9H2V7 528 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 FAM83DQ9H4H8 585 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 LDAHQ9H6V9 325 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 TRIM45Q9H8W5 580 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 EML4Q9HC35 981 aaKnown RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 XPNPEP1Q9NQW7 623 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 RGS18Q9NS28 235 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 TBC1D22BQ9NU19 505 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 PNPOQ9NVS9 261 aa4.6□□□□□ -1.67
PTCD3-212ENST00000477520 POLR3BQ9NW08 1133 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-212ENST00000477520 IL37Q9NZH6 218 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms