RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 TADA2BQ86TJ2 420 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PRPF39Q86UA1 669 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 AKAP14Q86UN6 197 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 P2RY8Q86VZ1 359 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PSTKQ8IV42 348 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 CPOQ8IVL8 374 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 SYCP3Q8IZU3 236 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 FBXW8Q8N3Y1 598 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 DNAAF3Q8N9W5 541 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 ZNF680Q8NEM1 530 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 ZNF671Q8TAW3 534 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 ENKURQ8TC29 256 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 CSGALNACT1Q8TDX6 532 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 DUSP19Q8WTR2 217 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 GDPD5Q8WTR4 605 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 SCFD2Q8WU76 684 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 TRAPPC12Q8WVT3 735 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 MAIP1Q8WWC4 291 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 STARD8Q92502 1023 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 EFHD2Q96C19 240 aaPredicted RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 RRP36Q96EU6 259 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 PDLIM5Q96HC4 596 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 ABHD8Q96I13 439 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 ZSCAN31Q96LW9 406 aaPredicted RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 AK8Q96MA6 479 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 C7orf26Q96N11 449 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 SMC6Q96SB8 1091 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PIP5K1AQ99755 562 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 SH3GL2Q99962 352 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 CITED2Q99967 270 aaPredicted RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 SPXQ9BT56 116 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 HGH1Q9BTY7 390 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PABPC3Q9H361 631 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 THAP9Q9H5L6 903 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 JMJD4Q9H9V9 463 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 SPACA1Q9HBV2 294 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PREBQ9HCU5 417 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 MID1IP1Q9NPA3 183 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 C8orf4Q9NR00 106 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 BATF3Q9NR55 127 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 NUDT15Q9NV35 164 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 TMLHEQ9NVH6 421 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 HAUS2Q9NVX0 235 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 CISD1Q9NZ45 108 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 GRHPRQ9UBQ7 328 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 CD300AQ9UGN4 299 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PADI1Q9ULC6 663 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 TMCO1Q9UM00 188 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PIN4Q9Y237 131 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 CBY1Q9Y3M2 126 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.42□□□□□ -2.02
XRN1-211ENST00000477237 CAPN7Q9Y6W3 813 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PIAS3Q9Y6X2 628 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 IGSF1Q8N6C5 1336 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PRRC2AP48634 2157 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 NACADO15069 1562 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 UHRF1BP1LA0JNW5 1464 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 ANKRD30AQ9BXX3 1397 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 A0A1W2PPW3 197 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 FRMD3A2A2Y4 597 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 MEIOCA2RUB1 952 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 FAM90A20PA6NIJ5 464 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 SLCO1B7G3V0H7 640 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 GOLGA8RI6L899 631 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 WNT9BO14905 357 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 LIN7AO14910 233 aaPredicted RBP2.41□□□□□ -2.02
XRN1-211ENST00000477237 SEPT4O43236 478 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 BUB1O43683 1085 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 GPRIN2O60269 458 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 TBX10O75333 385 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 RPS6KA5O75582 802 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 CTAG2O75638 210 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 GJB3O75712 270 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 RBBP9O75884 186 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 TOMM70O94826 608 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 SORBS2O94875 1100 aaKnown RBP2.41□□□□□ -2.02
XRN1-211ENST00000477237 NDUFB4O95168 129 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 SLU7O95391 586 aaKnown RBP2.41□□□□□ -2.02
XRN1-211ENST00000477237 MLYCDO95822 493 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 CLPTM1O96005 669 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 IFNB1P01574 187 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 FGF4P08620 206 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 ANPEPP15144 967 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 HOXB8P17481 243 aaPredicted RBP2.41□□□□□ -2.02
XRN1-211ENST00000477237 SRD5A1P18405 259 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 RXRAP19793 462 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 CCNA2P20248 432 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 NFKBIAP25963 317 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 PTBP1P26599 531 aaKnown RBP eCLIP2.41□□□□□ -2.02
XRN1-211ENST00000477237 PDIA3P30101 505 aaKnown RBP2.41□□□□□ -2.02
XRN1-211ENST00000477237 TLX1P31314 330 aaPredicted RBP2.41□□□□□ -2.02
XRN1-211ENST00000477237 BMI1P35226 326 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 RGS2P41220 211 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 GDI2P50395 445 aaKnown RBP2.41□□□□□ -2.02
XRN1-211ENST00000477237 GBX2P52951 348 aaPredicted RBP2.41□□□□□ -2.02
XRN1-211ENST00000477237 PPP5CP53041 499 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 GSDMDP57764 484 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 TSPAN5P62079 268 aa2.41□□□□□ -2.02
XRN1-211ENST00000477237 PLOD1Q02809 727 aaPredicted RBP2.41□□□□□ -2.02
XRN1-211ENST00000477237 SULT2A1Q06520 285 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms