RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	ZNF474	Q6S9Z5	364 aa	Predicted RBP	6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	WDR88	Q6ZMY6	472 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	ATG4D	Q86TL0	474 aa	Predicted RBP	6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	IGFN1	Q86VF2	1251 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	RFX6	Q8HWS3	928 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	CAMK1D	Q8IU85	385 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	CARF	Q8N187	725 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	FAM47B	Q8NA70	645 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	ADAMTS14	Q8WXS8	1223 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	OTUB1	Q96FW1	271 aa	Predicted RBP	6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	TOX2	Q96NM4	488 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	LRRC37B	Q96QE4	947 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	ADAM2	Q99965	735 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	FAM213A	Q9BRX8	229 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	SGPP1	Q9BX95	441 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	PUS3	Q9BZE2	481 aa	Known RBP	6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	HIPK3	Q9H422	1215 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	RPF1	Q9H9Y2	349 aa	Known RBP	6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	KCNK12	Q9HB15	430 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	DPP3	Q9NY33	737 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	HOXC10	Q9NYD6	342 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	RAI14	Q9P0K7	980 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	SLC8A2	Q9UPR5	921 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	KCNK6	Q9Y257	313 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	SQOR	Q9Y6N5	450 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	SMCHD1	A6NHR9	2005 aa		6.64	□□□□□ -1.35
LRCH3-215	ENST00000476664	EME2	A4GXA9	379 aa	Predicted RBP	6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	FAM149A	A5PLN7	773 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	LOC285556	D6RIA3	1793 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CLIC1	O00299	241 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	PLK4	O00444	970 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CTDSPL	O15194	276 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	NUDT21	O43809	227 aa	Known RBP	6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	KIF5C	O60282	957 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	NME6	O75414	186 aa	Predicted RBP	6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	LUC7L3	O95232	432 aa	Known RBP	6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	PCCB	P05166	539 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	RAB40AL	P0C0E4	278 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CYBA	P13498	195 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CYP11B2	P19099	503 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	ANP32A	P39687	249 aa	Known RBP	6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	PPP2R2B	Q00005	443 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	HHEX	Q03014	270 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	SPOCK1	Q08629	439 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	PPP1R8	Q12972	351 aa	Known RBP	6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	ABR	Q12979	859 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	IL24	Q13007	206 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	NR1D2	Q14995	579 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CCDC142	Q17RM4	750 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CAVIN4	Q5BKX8	364 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	PLAC9	Q5JTB6	97 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CYP4A22	Q5TCH4	519 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	KCTD11	Q693B1	232 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	PODNL1	Q6PEZ8	512 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	PQLC2	Q6ZP29	291 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	ZNF573	Q86YE8	665 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	ZNF611	Q8N823	705 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CLEC1A	Q8NC01	280 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	SLC9A6	Q92581	669 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CASP10	Q92851	521 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CAVIN3	Q969G5	261 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CDKN2AIPNL	Q96HQ2	116 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	PBK	Q96KB5	322 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	SIGLEC10	Q96LC7	697 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	FEV	Q99581	238 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	MOV10L1	Q9BXT6	1211 aa	Known RBP	6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	TEX101	Q9BY14	249 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	GPR87	Q9BY21	358 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	MTMR12	Q9C0I1	747 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	ATG10	Q9H0Y0	220 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	CHMP4B	Q9H444	224 aa	Known RBP	6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	LRRC40	Q9H9A6	602 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	WDR6	Q9NNW5	1121 aa	Known RBP	6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	TRPV5	Q9NQA5	729 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	NDRG3	Q9UGV2	375 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	IPO11	Q9UI26	975 aa	Known RBP	6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	TLK1	Q9UKI8	766 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	NUDC	Q9Y266	331 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	EXOC6B	Q9Y2D4	811 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	IRAK3	Q9Y616	596 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664	MYO18B	Q8IUG5	2567 aa		6.63	□□□□□ -1.35
LRCH3-215	ENST00000476664		A0A1B0GUL6	1792 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	COL4A3	Q01955	1670 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	GAGE12B	A1L429	117 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	GAGE12H	A6NDE8	117 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	TMEM8B	A6NDV4	472 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	MARCH11	A6NNE9	402 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	VCY	O14598	125 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	NDUFS4	O43181	175 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	KLK8	O60259	260 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	ATG13	O75143	517 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	CDKL5	O76039	1030 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	ZNF202	O95125	648 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	WNT11	O96014	354 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	LCAT	P04180	440 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	PGK2	P07205	417 aa		6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	APEH	P13798	732 aa	Known RBP	6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	HNRNPA2B1	P22626	353 aa	Known RBP	6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	AZGP1	P25311	298 aa	Known RBP	6.62	□□□□□ -1.35
LRCH3-215	ENST00000476664	TRPC1	P48995	793 aa		6.62	□□□□□ -1.35

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