RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 STX3Q13277 289 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 FASTKQ14296 549 aaKnown RBP9.21□□□□□ -0.94
DDX39B-217ENST00000474961 GPR18Q14330 331 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 ARHGAP19Q14CB8 494 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 PCBP2Q15366 365 aaKnown RBP eCLIP9.21□□□□□ -0.942e-7■■■■□ 26
DDX39B-217ENST00000474961 CYP2A13Q16696 494 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 PTCHD3Q3KNS1 767 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 CFAP157Q5JU67 520 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.21□□□□□ -0.94
DDX39B-217ENST00000474961 CES4AQ5XG92 561 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 ANKS6Q68DC2 871 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 TTC19Q6DKK2 380 aaPredicted RBP9.21□□□□□ -0.94
DDX39B-217ENST00000474961 TMEM26Q6ZUK4 368 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 RPS27LQ71UM5 84 aaKnown RBP9.21□□□□□ -0.94
DDX39B-217ENST00000474961 RBM12BQ8IXT5 1001 aaKnown RBP9.21□□□□□ -0.94
DDX39B-217ENST00000474961 SLC35F3Q8IY50 421 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 KLHDC8AQ8IYD2 350 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 LRRC56Q8IYG6 542 aaPredicted RBP9.21□□□□□ -0.94
DDX39B-217ENST00000474961 SYTL1Q8IYJ3 562 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 DEPDC4Q8N2C3 294 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 RAB42Q8N4Z0 105 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 C2orf73Q8N5S3 287 aaPredicted RBP9.21□□□□□ -0.94
DDX39B-217ENST00000474961 EID2Q8N6I1 236 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 AVL9Q8NBF6 648 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 PPFIBP2Q8ND30 876 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 OR4E2Q8NGC2 313 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 OR6Y1Q8NGX8 325 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 OR56A3Q8NH54 315 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 OR4C6Q8NH72 309 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 LRRC8CQ8TDW0 803 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 LCN9Q8WX39 176 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 PYCR2Q96C36 320 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 RAB11FIP5Q9BXF6 653 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 C1QTNF3Q9BXJ4 246 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 STN1Q9H668 368 aaKnown RBP9.21□□□□□ -0.94
DDX39B-217ENST00000474961 MANSC1Q9H8J5 431 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 SEMA4GQ9NTN9 838 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 DNAAF2Q9NVR5 837 aaKnown RBP9.21□□□□□ -0.94
DDX39B-217ENST00000474961 PCTPQ9UKL6 214 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 ASB1Q9Y576 335 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 ASCC3Q8N3C0 2202 aaKnown RBP9.21□□□□□ -0.94
DDX39B-217ENST00000474961 ASXL3Q9C0F0 2248 aa9.21□□□□□ -0.94
DDX39B-217ENST00000474961 WDFY4Q6ZS81 3184 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 UNC13CQ8NB66 2214 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 ZNF839A8K0R7 811 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 E7ENX8 843 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 K7EPI3 171 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 E2F3O00716 465 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 SIGLEC6O43699 453 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 ITM2AO43736 263 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 NPHS1O60500 1241 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 LRP3O75074 770 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 H2AFYO75367 372 aaKnown RBP9.2□□□□□ -0.94
DDX39B-217ENST00000474961 STK16O75716 305 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 WDR47O94967 919 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 MYF5P13349 255 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 GRK2P25098 689 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 SHMT2P34897 504 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 CCR10P46092 362 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 CDH13P55290 713 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 TAP2Q03519 686 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 BST1Q10588 318 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 BIRC2Q13490 618 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 TSTA3Q13630 321 aaPredicted RBP9.2□□□□□ -0.94
DDX39B-217ENST00000474961 GTF2H2Q13888 395 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 SUZ12Q15022 739 aaKnown RBP9.2□□□□□ -0.94
DDX39B-217ENST00000474961 PLCL1Q15111 1095 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 CSRP2Q16527 193 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 ATG16L1Q676U5 607 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 ZCCHC8Q6NZY4 707 aaKnown RBP9.2□□□□□ -0.94
DDX39B-217ENST00000474961 GTF2H2CQ6P1K8 395 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 METTL2BQ6P1Q9 378 aaKnown RBP9.2□□□□□ -0.94
DDX39B-217ENST00000474961 SUSD1Q6UWL2 747 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 LRRC70Q7Z2Q7 622 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 GOLGA7Q7Z5G4 137 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 THOC6Q86W42 341 aaKnown RBP9.2□□□□□ -0.94
DDX39B-217ENST00000474961 AMIGO1Q86WK6 493 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 ZNF761Q86XN6 746 aaPredicted RBP9.2□□□□□ -0.94
DDX39B-217ENST00000474961 TEX9Q8N6V9 391 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 ARL10Q8N8L6 244 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 SNX31Q8N9S9 440 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 LINC01555Q8NAE3 123 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 OR2L8Q8NGY9 312 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 HMGCLL1Q8TB92 370 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 RAB3IL1Q8TBN0 382 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 PPP4R1Q8TF05 950 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 ZNF483Q8TF39 744 aaPredicted RBP9.2□□□□□ -0.94
DDX39B-217ENST00000474961 SMPDL3AQ92484 453 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 SH3KBP1Q96B97 665 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 MED8Q96G25 268 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 CNDP1Q96KN2 507 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 NSUN5Q96P11 429 aaKnown RBP9.2□□□□□ -0.94
DDX39B-217ENST00000474961 SGPP1Q9BX95 441 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 TBC1D10AQ9BXI6 508 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 PITPNM3Q9BZ71 974 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 GRIP2Q9C0E4 1043 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 DRC3Q9H069 523 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 SRMSQ9H3Y6 488 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 GSTO2Q9H4Y5 243 aa9.2□□□□□ -0.94
DDX39B-217ENST00000474961 SLC32A1Q9H598 525 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms