RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SDE2Q6IQ49 451 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 SLC2A7Q6PXP3 512 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 TRMT11Q7Z4G4 463 aaKnown RBP21.11■□□□□ 0.97
CCM2-206ENST00000474617 PDZD3Q86UT5 571 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 LRRTM4Q86VH4 590 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 AMZ2Q86W34 360 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 OR52E4Q8NGH9 312 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 GTF2H4Q92759 462 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 FAM131CQ96AQ9 280 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 ITCHQ96J02 903 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 PKP2Q99959 881 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 KXD1Q9BQD3 176 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 KCNH6Q9H252 994 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 RMI1Q9H9A7 625 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 INTS7Q9NVH2 962 aaKnown RBP21.11■□□□□ 0.97
CCM2-206ENST00000474617 LRRK1Q38SD2 2015 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 TRANK1O15050 2925 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 C9JVG2 144 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 DENRO43583 198 aaKnown RBP21.1■□□□□ 0.97
CCM2-206ENST00000474617 PI15O43692 258 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 RNASEH2AO75792 299 aaKnown RBP21.1■□□□□ 0.97
CCM2-206ENST00000474617 ZNF8P17098 575 aaPredicted RBP21.1■□□□□ 0.97
CCM2-206ENST00000474617 KELP23276 732 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 DOC2AQ14183 400 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 STARD3Q14849 445 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 HIST2H2ACQ16777 129 aaPredicted RBP21.1■□□□□ 0.97
CCM2-206ENST00000474617 SPIN4Q56A73 249 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 HIST2H2AA3Q6FI13 130 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 KIAA1161Q6NSJ0 714 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 ERMP1Q7Z2K6 904 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 ANKFN1Q8N957 763 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 PAPD5Q8NDF8 572 aaKnown RBP21.1■□□□□ 0.97
CCM2-206ENST00000474617 GATA6Q92908 595 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 RAD51AP1Q96B01 352 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 MED8Q96G25 268 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 HHIPQ96QV1 700 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 SIRT5Q9NXA8 310 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 GULP1Q9UBP9 304 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 HCN2Q9UL51 889 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 PPT2Q9UMR5 302 aa21.1■□□□□ 0.97
CCM2-206ENST00000474617 ZFC3H1O60293 1989 aaKnown RBP21.1■□□□□ 0.97
CCM2-206ENST00000474617 A0A096LPI6 279 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 K7ESM1 405 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 FOXE1O00358 373 aaPredicted RBP21.09■□□□□ 0.97
CCM2-206ENST00000474617 PIM1P11309 404 aaPredicted RBP21.09■□□□□ 0.97
CCM2-206ENST00000474617 ATP6V1B2P21281 511 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 ACADLP28330 430 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 PBLDP30039 288 aaPredicted RBP21.09■□□□□ 0.97
CCM2-206ENST00000474617 S100A3P33764 101 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 SFT2D3Q587I9 215 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 HABP4Q5JVS0 413 aaKnown RBP21.09■□□□□ 0.97
CCM2-206ENST00000474617 LRIF1Q5T3J3 769 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 NOXRED1Q6NXP6 359 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 PARM1Q6UWI2 310 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 ZNF547Q8IVP9 402 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 DCUN1D3Q8IWE4 304 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 TBC1D21Q8IYX1 336 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 LILRA2Q8N149 483 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 EME1Q96AY2 570 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 OR52E6Q96RD3 313 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 HAUS8Q9BT25 410 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 TEX101Q9BY14 249 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 CKAP5Q14008 2032 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 KMOO15229 486 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 LINC01565O15544 149 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 C7P10643 843 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 PDHA2P29803 388 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 BDKRB1P46663 353 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 TRPC1P48995 793 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 AQP4P55087 323 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 RPS21P63220 83 aaKnown RBP21.09■□□□□ 0.97
CCM2-206ENST00000474617 PHEXP78562 749 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 CDK3Q00526 305 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 RABL3Q5HYI8 236 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 ATG9BQ674R7 924 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 MED27Q6P2C8 311 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 SUSD1Q6UWL2 747 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 CYP2R1Q6VVX0 501 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 TMEM132CQ8N3T6 1108 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 ZNF480Q8WV37 535 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 CXorf40BQ96DE9 158 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 CHFRQ96EP1 664 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 GABRG3Q99928 467 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 GDF15Q99988 308 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 PCBD2Q9H0N5 130 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 YY1AP1Q9H869 796 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 TRPV5Q9NQA5 729 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 ADGRE2Q9UHX3 823 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 ACSL5Q9ULC5 683 aa21.09■□□□□ 0.97
CCM2-206ENST00000474617 E7EQ34 232 aa21.08■□□□□ 0.96
CCM2-206ENST00000474617 MID1O15344 667 aa21.08■□□□□ 0.96
CCM2-206ENST00000474617 SDC1P18827 310 aa21.08■□□□□ 0.96
CCM2-206ENST00000474617 FASP25445 335 aa21.08■□□□□ 0.96
CCM2-206ENST00000474617 ACSM2AQ08AH3 577 aa21.08■□□□□ 0.96
CCM2-206ENST00000474617 DMPKQ09013 629 aa21.08■□□□□ 0.96
CCM2-206ENST00000474617 MTAPQ13126 283 aa21.08■□□□□ 0.96
CCM2-206ENST00000474617 LRRC36Q1X8D7 754 aa21.08■□□□□ 0.96
CCM2-206ENST00000474617 SPANXN4Q5MJ08 99 aa21.08■□□□□ 0.96
CCM2-206ENST00000474617 ACSM2BQ68CK6 577 aa21.08■□□□□ 0.96
CCM2-206ENST00000474617 SLCO4C1Q6ZQN7 724 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms