RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 SMAD5Q99717 465 aaKnown RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 CPNE1Q99829 537 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 DHRS4Q9BTZ2 278 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 NUDT9Q9BW91 350 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 UGT1A7Q9HAW7 530 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 UGT1A10Q9HAW8 530 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 UGT1A8Q9HAW9 530 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 FANCEQ9HB96 536 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 SYTL2Q9HCH5 934 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 SLAMF7Q9NQ25 335 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 SMYD2Q9NRG4 433 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 IARS2Q9NSE4 1012 aaKnown RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 SOHLH2Q9NX45 425 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 IL1RAPL1Q9NZN1 696 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 TXNDC16Q9P2K2 825 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 FBXO5Q9UKT4 447 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 POMT2Q9UKY4 750 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 ACSL5Q9ULC5 683 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 G3BP2Q9UN86 482 aaKnown RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 VPS9D1Q9Y2B5 631 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 DOPEY1Q5JWR5 2465 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 TRBV5-4A0A0C4DH59 114 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 OR6C74A6NCV1 312 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 MGAT4DA6NG13 374 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 GOLGA6L10A6NI86 522 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 CXorf49A8MYA2 514 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 GOLGA8KD6RF30 607 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 POC1B-GALNT4F8VUJ3 575 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 GOLGA8TH3BQL2 631 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 MATN2O00339 956 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 SASH3O75995 380 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 MSH3P20585 1137 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 CNTFP26441 200 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 NDUFS1P28331 727 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 SLC1A2P43004 574 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 TTPAP49638 278 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 RRADP55042 308 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 CSE1LP55060 971 aaKnown RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 ITGA1P56199 1179 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 MRPL49Q13405 166 aaKnown RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 EFTUD2Q15029 972 aaKnown RBP eCLIP8.77□□□□□ -1.018e-7■■■■□ 19.8
SF3A1-206ENST00000471037 TYSND1Q2T9J0 566 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 EIF2S3LQ2VIR3 472 aaKnown RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 KRT71Q3SY84 523 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 BCL7AQ4VC05 210 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 ZRANB3Q5FWF4 1079 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 ZNF789Q5FWF6 425 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 CEP85LQ5SZL2 805 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 LGSNQ5TDP6 509 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 PRAMEF17Q5VTA0 474 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 LYPLAL1Q5VWZ2 237 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 LCN10Q6JVE6 187 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 ARMC6Q6NXE6 501 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 DUS1LQ6P1R4 473 aaKnown RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 MAMDC2Q7Z304 686 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 SDCCAG8Q86SQ7 713 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 SYTL1Q8IYJ3 562 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 ZBTB2Q8N680 514 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 RBMXL3Q8N7X1 1067 aaKnown RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 C2CD4AQ8NCU7 369 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 OR2L2Q8NH16 312 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 ZNF398Q8TD17 642 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 ULK4Q96C45 1275 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 RMDN2Q96LZ7 410 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 C12orf66Q96MD2 445 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 PPM1MQ96MI6 270 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 DPH2Q9BQC3 489 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 PITPNM3Q9BZ71 974 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 WWP1Q9H0M0 922 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 ASB8Q9H765 288 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 C1GALT1Q9NS00 363 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 PCMTD2Q9NV79 361 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 INTS10Q9NVR2 710 aaKnown RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 GPR83Q9NYM4 423 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 C5AR2Q9P296 337 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 MARCH4Q9P2E8 410 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 PSMC3IPQ9P2W1 217 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 LGALS13Q9UHV8 139 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 ZNF180Q9UJW8 692 aa8.77□□□□□ -1.01
SF3A1-206ENST00000471037 CORO1CQ9ULV4 474 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 CFAP20Q9Y6A4 193 aaKnown RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 RP1L1Q8IWN7 2480 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-206ENST00000471037 A1L4Q6 167 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 OR51F1A6NGY5 319 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 SLC9B1P1A6NJY1 282 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 ENO4A6NNW6 628 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 AGAP14A8MT82 685 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 LDLRP01130 860 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 SLC35G4P0C7Q5 338 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 MYZAPP0CAP1 466 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 POLR2CP19387 275 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-206ENST00000471037 CDH3P22223 829 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 GCAP28676 217 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 PBLDP30039 288 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-206ENST00000471037 ATP5DP30049 168 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 AKT1P31749 480 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 SPRP35270 261 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-206ENST00000471037 PRKAA1Q13131 559 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 CTBP1Q13363 440 aa8.76□□□□□ -1.01
SF3A1-206ENST00000471037 ITIH4Q14624 930 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms