RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 CHCHD3Q9NX63 227 aaKnown RBP11.33□□□□□ -0.6
FAM228B-203ENST00000469867 KCTD3Q9Y597 815 aa11.33□□□□□ -0.6
FAM228B-203ENST00000469867 ACTL7BQ9Y614 415 aa11.33□□□□□ -0.6
FAM228B-203ENST00000469867 UTP20O75691 2785 aaKnown RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 DOPEY2Q9Y3R5 2298 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 MYOCOSA0A1B0GUC4 107 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 POLR1CO15160 346 aaPredicted RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 MAP3K7O43318 606 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 RAD1O60671 282 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 UBXN7O94888 489 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 PGM3O95394 542 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 ALDOAP04075 364 aaKnown RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 PRKAR1AP10644 381 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 FUT4P22083 530 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 EPHA4P54764 986 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 TMEM115Q12893 351 aaPredicted RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 PDPK2PQ6A1A2 396 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 PACS1Q6VY07 963 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 RNF111Q6ZNA4 994 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 TMEM26Q6ZUK4 368 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 TIPARPQ7Z3E1 657 aaKnown RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 CMC1Q7Z7K0 106 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 C11orf96Q7Z7L8 435 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 FAM111AQ96PZ2 611 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 CAB39LQ9H9S4 337 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 GPN2Q9H9Y4 310 aaPredicted RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 RAD18Q9NS91 495 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 NFKBIL1Q9UBC1 381 aaPredicted RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 WDR37Q9Y2I8 494 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 AAR2Q9Y312 384 aaKnown RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 SPTBP11277 2137 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 SPTAN1Q13813 2472 aaKnown RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 LOC285095A0A1B0GVY8 99 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 ERI2A8K979 691 aaKnown RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 PRPF4O43172 522 aaKnown RBP eCLIP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 ANXA9O76027 345 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 STK17BO94768 372 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 AMD1P17707 334 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 XRCC1P18887 633 aaPredicted RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 SH3BP2P78314 561 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 MC2RQ01718 297 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 SEPT6Q14141 434 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 TREML1Q86YW5 311 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 DENND6AQ8IWF6 608 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 NLGN4XQ8N0W4 816 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 NLGN4YQ8NFZ3 816 aaPredicted RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 RSC1A1Q92681 617 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 TEFMQ96QE5 360 aaKnown RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 PANX3Q96QZ0 392 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 MECRQ9BV79 373 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 NMUR2Q9GZQ4 415 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 C20orf96Q9NUD7 363 aaPredicted RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 ZNF358Q9NW07 568 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 IL17BQ9UHF5 180 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 HEMK1Q9Y5R4 338 aaPredicted RBP11.32□□□□□ -0.6
FAM228B-203ENST00000469867 SEC16AO15027 2179 aa11.32□□□□□ -0.6
FAM228B-203ENST00000469867 IQANK1A0A1B0GTG1 560 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 LILRA5A6NI73 299 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 OR2AG2A6NM03 316 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 CAPN5O15484 640 aaPredicted RBP11.31□□□□□ -0.6
FAM228B-203ENST00000469867 NKX2-8O15522 239 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 VEGFDO43915 354 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 CCDC22O60826 627 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 HAUS5O94927 633 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 VAPBO95292 243 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 SNRPAP09012 282 aaKnown RBP11.31□□□□□ -0.6
FAM228B-203ENST00000469867 TPP2P29144 1249 aaPredicted RBP11.31□□□□□ -0.6
FAM228B-203ENST00000469867 CA5AP35218 305 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 LEPRP48357 1165 aaKnown RBP11.31□□□□□ -0.6
FAM228B-203ENST00000469867 CTBP1Q13363 440 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 MSLNQ13421 630 aaPredicted RBP11.31□□□□□ -0.6
FAM228B-203ENST00000469867 GPR18Q14330 331 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 LIN52Q52LA3 116 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 TEDDM1Q5T9Z0 273 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 CEACAM20Q6UY09 585 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 GLT6D1Q7Z4J2 308 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 HIPK4Q8NE63 616 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 STMN2Q93045 179 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 IL22Q9GZX6 179 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 MMADHCQ9H3L0 296 aaPredicted RBP11.31□□□□□ -0.6
FAM228B-203ENST00000469867 FBXO8Q9NRD0 319 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 IARS2Q9NSE4 1012 aaKnown RBP11.31□□□□□ -0.6
FAM228B-203ENST00000469867 STARD5Q9NSY2 213 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 DDX18Q9NVP1 670 aaKnown RBP11.31□□□□□ -0.6
FAM228B-203ENST00000469867 STX18Q9P2W9 335 aaKnown RBP11.31□□□□□ -0.6
FAM228B-203ENST00000469867 SOX13Q9UN79 622 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 PSMD13Q9UNM6 376 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 LOC101059948A0A1B0GTJ6 334 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 ENO1P06733 434 aaKnown RBP11.31□□□□□ -0.6
FAM228B-203ENST00000469867 KITP10721 976 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 IDSP22304 550 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 GABRB3P28472 473 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 PGM1P36871 562 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 CLCNKAP51800 687 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 CTSCP53634 463 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 CHRNA6Q15825 494 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 SLC14A2Q15849 920 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 CES4AQ5XG92 561 aa11.31□□□□□ -0.6
FAM228B-203ENST00000469867 C16orf46Q6P387 395 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms