RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ZNF646O15015 1829 aaPredicted RBP8.81□□□□□ -1
SMARCE1-207ENST00000469334 HRO43593 1189 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 PCDHGA12O60330 932 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 CREG1O75629 220 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 TGM6O95932 706 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ITGB1P05556 798 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 S100A6P06703 90 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 PRKAR1AP10644 381 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 AZGP1P25311 298 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 MAOBP27338 520 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 TRIM23P36406 574 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 CRKP46108 304 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ALDH9A1P49189 494 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 CCT3P49368 545 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 FOXA1P55317 472 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 POLR2GP62487 172 aaKnown RBP eCLIP8.8□□□□□ -1
SMARCE1-207ENST00000469334 PURAQ00577 322 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 CREMQ03060 361 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 NPRL3Q12980 569 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 INO80DQ53TQ3 878 aaPredicted RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 ZMAT1Q5H9K5 638 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 C10orf62Q5T681 223 aaPredicted RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 RETSATQ6NUM9 610 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ZNF549Q6P9A3 640 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 BNIPLQ7Z465 357 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 DDX53Q86TM3 631 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 ISCA2Q86U28 154 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 TRIM69Q86WT6 500 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ZSWIM9Q86XI8 627 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ZDHHC21Q8IVQ6 265 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 FAM126BQ8IXS8 530 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 PYROXD2Q8N2H3 581 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 CPA6Q8N4T0 437 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 DNAJB8Q8NHS0 232 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 RHEBL1Q8TAI7 183 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 FANK1Q8TC84 345 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ZNF431Q8TF32 576 aaPredicted RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 SMG7Q92540 1137 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 TRMT61AQ96FX7 289 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 ITCHQ96J02 903 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 TEKT5Q96M29 485 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 SAMD11Q96NU1 681 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 CAMKK2Q96RR4 588 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 TBL1YQ9BQ87 522 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 APOL2Q9BQE5 337 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 PDCD2LQ9BRP1 358 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 MARVELD1Q9BSK0 173 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 SHARPINQ9H0F6 387 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 TNKS2Q9H2K2 1166 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 CLEC4MQ9H2X3 399 aaPredicted RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 LDAHQ9H6V9 325 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 FOLH1BQ9HBA9 442 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 EMC7Q9NPA0 242 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 PCDHB16Q9NRJ7 776 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 TREX1Q9NSU2 369 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 EVA1BQ9NVM1 165 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 MCUBQ9NWR8 336 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 LYARQ9NX58 379 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 AASSQ9UDR5 926 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 FAM198AQ9UFP1 575 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 KIF25Q9UIL4 384 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 RAB23Q9ULC3 237 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 NEUROG3Q9Y4Z2 214 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 HRH3Q9Y5N1 445 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ACTL7AQ9Y615 435 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 OTOFQ9HC10 1997 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 CIB4A0PJX0 185 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 MROH6A6NGR9 719 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 PRSS44E7EML9 344 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 CACNG3O60359 315 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ACSL4O60488 711 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 MSCO60682 206 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 TSC22D2O75157 780 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 OR5F1O95221 314 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 LDOC1O95751 146 aaPredicted RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 STAU1O95793 577 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 PGRP06401 933 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 UROSP10746 265 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 SLC2A3P11169 496 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 MYCLP12524 364 aaPredicted RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 BMP8BP34820 402 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 HOXA1P49639 335 aaPredicted RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 CLCNKAP51800 687 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 BTG1P62324 171 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 RPP38P78345 283 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 ZNF33AQ06730 810 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 CSTF3Q12996 717 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 CAPSQ13938 189 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 CAMK1Q14012 370 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 LARS2Q15031 903 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 TSC22D1Q15714 1073 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 HECTD2Q5U5R9 776 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ATF7IP2Q5U623 682 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ATG9BQ674R7 924 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 FAHD1Q6P587 224 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 KDELC1Q6UW63 502 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 OVCH2Q7RTZ1 564 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 BMP8AQ7Z5Y6 402 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 SLC51AQ86UW1 340 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 FAM124AQ86V42 546 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms