RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 KCNK7Q9Y2U2 307 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 PCDHGA5Q9Y5G8 931 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 PCDHGA1Q9Y5H4 931 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 CLIC4Q9Y696 253 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 LINC00854A0A1B0GVQ3 168 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 KANSL1LA0AUZ9 987 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 C1orf226A1L170 272 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 SERINC4A6NH21 518 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 LRRC72A6NJI9 287 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 EIF4E1BA6NMX2 242 aaKnown RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 FAM90A26D6RGX4 464 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 CCDC188H7C350 402 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 L7N2F9 121 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 ANKRD28O15084 1053 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 POLR3GO15318 223 aaPredicted RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 VEGFDO43915 354 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 HS6ST1O60243 411 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 TADA2AO75478 443 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 JRKO75564 520 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 SLC25A12O75746 678 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 LETM1O95202 739 aaPredicted RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 C22orf31O95567 290 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 PDGFRAP16234 1089 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 HOXA13P31271 388 aaPredicted RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 STIP1P31948 543 aaKnown RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 CTNNB1P35222 781 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 GLIPR1P48060 266 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 NME5P56597 212 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 MRPS34P82930 218 aaKnown RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 MECOMQ03112 1051 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 GBE1Q04446 702 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 DPYSQ14117 519 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 GAMTQ14353 236 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 ZNF273Q14593 569 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 PNLIPRP3Q17RR3 467 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 FILIP1LQ4L180 1135 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 IGSF11Q5DX21 431 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 SHEQ5VZ18 495 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 CENPPQ6IPU0 288 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 FAM171BQ6P995 826 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 PSRC1Q6PGN9 363 aaPredicted RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 AFTPHQ6ULP2 937 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 MOXD1Q6UVY6 613 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 RAD9BQ6WBX8 426 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 ZNF852Q6ZMS4 543 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 TTC21BQ7Z4L5 1316 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 KDM8Q8N371 416 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 PI4KAP1Q8N8J0 262 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 TC2NQ8N9U0 490 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 NHLRC2Q8NBF2 726 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 OR1J2Q8NGS2 313 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 OR52I2Q8NH67 350 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 ST7LQ8TDW4 575 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 DNAAF4Q8WXU2 420 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 SGCDQ92629 289 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 RAB7BQ96AH8 199 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 ALG14Q96F25 216 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 THUMPD2Q9BTF0 503 aaKnown RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 TRMT61BQ9BVS5 477 aaKnown RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 FAM129AQ9BZQ8 928 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 TRIM7Q9C029 511 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 PIGMQ9H3S5 423 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 TMEM206Q9H813 350 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 POLR1BQ9H9Y6 1135 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 SERINC1Q9NRX5 453 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 TCP11L1Q9NUJ3 509 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 DDX18Q9NVP1 670 aaKnown RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 ERAP1Q9NZ08 941 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 CNIH4Q9P003 139 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 CNOT8Q9UFF9 292 aaKnown RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 ERRFI1Q9UJM3 462 aaPredicted RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 FAF1Q9UNN5 650 aaPredicted RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 ITM2BQ9Y287 266 aa3.57□□□□□ -1.84
VPS50-209ENST00000467326 TDRKHQ9Y2W6 561 aaKnown RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 DDX49Q9Y6V7 483 aaKnown RBP3.57□□□□□ -1.84
VPS50-209ENST00000467326 EDDM13A0A1B0GTR0 161 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 TMEM178BH3BS89 294 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 MAP2K7O14733 419 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 ATP2A1O14983 1001 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 EIF3DO15371 548 aaKnown RBP eCLIP3.56□□□□□ -1.84
VPS50-209ENST00000467326 KCNN4O15554 427 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 HCRTR2O43614 444 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 NDUFS3O75489 264 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 TPM1P09493 284 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 FAM86B2P0C5J1 330 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 UROSP10746 265 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 ETS1P14921 441 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 PRLRP16471 622 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 CD9P21926 228 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 CCND2P30279 289 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 MC5RP33032 325 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 SOX6P35712 828 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 PRCPP42785 496 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 ARCN1P48444 511 aaKnown RBP3.56□□□□□ -1.84
VPS50-209ENST00000467326 CAMPP49913 170 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 VCPP55072 806 aaKnown RBP3.56□□□□□ -1.84
VPS50-209ENST00000467326 ST8SIA6P61647 398 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 GAGE5Q13069 117 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 GAGE6Q13070 117 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 IKQ13123 557 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms