RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 GTDC1Q4AE62 458 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 GLIPR1L2Q4G1C9 344 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 ASPRV1Q53RT3 343 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 GKAP1Q5VSY0 366 aaPredicted RBP3.14□□□□□ -1.91
XRN1-206ENST00000467077 CCDC30Q5VVM6 783 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 HAUS3Q68CZ6 603 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 CLEC4GQ6UXB4 293 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 TPRG1Q6ZUI0 275 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 RAPH1Q70E73 1250 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 SCML4Q8N228 414 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 Q8N7P7 452 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 PDILTQ8N807 584 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 GSDMBQ8TAX9 411 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 POMGNT1Q8WZA1 660 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 SMPDL3BQ92485 455 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 ELMOD3Q96FG2 381 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 RAB11FIP5Q9BXF6 653 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 APOBEC3GQ9HC16 384 aaKnown RBP3.14□□□□□ -1.91
XRN1-206ENST00000467077 ABCB10Q9NRK6 738 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 SLC38A7Q9NVC3 462 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 SETD4Q9NVD3 440 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 TRMT1Q9NXH9 659 aaKnown RBP3.14□□□□□ -1.91
XRN1-206ENST00000467077 RCC2Q9P258 522 aaKnown RBP3.14□□□□□ -1.91
XRN1-206ENST00000467077 DBNLQ9UJU6 430 aaKnown RBP3.14□□□□□ -1.91
XRN1-206ENST00000467077 CELA1Q9UNI1 258 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 DLG5Q8TDM6 1919 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 PSME4Q14997 1843 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 NPC1L1Q9UHC9 1359 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 KDM3BQ7LBC6 1761 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 OR2M5A3KFT3 312 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 TMEM8BA6NDV4 472 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 A8MZ25 164 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 F5H0A9 414 aaPredicted RBP3.13□□□□□ -1.91
XRN1-206ENST00000467077 TMCC2O75069 709 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 RNASEH2AO75792 299 aaKnown RBP3.13□□□□□ -1.91
XRN1-206ENST00000467077 IGHV4-38-2P0DP08 117 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 ACTN1P12814 892 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 LAMP2P13473 410 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 CHMP24386 653 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 MMP15P51511 669 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 ASTE1Q2TB18 679 aaPredicted RBP3.13□□□□□ -1.91
XRN1-206ENST00000467077 HYIQ5T013 277 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 NDUFAF5Q5TEU4 345 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 SNX30Q5VWJ9 437 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 JADE1Q6IE81 842 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 KLHL35Q6PF15 583 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 TMED8Q6PL24 325 aaPredicted RBP3.13□□□□□ -1.91
XRN1-206ENST00000467077 SARM1Q6SZW1 724 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 CFAP77Q6ZQR2 320 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 PTOV1Q86YD1 416 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 CEP97Q8IW35 865 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 NGEFQ8N5V2 710 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 DCPSQ96C86 337 aaKnown RBP3.13□□□□□ -1.91
XRN1-206ENST00000467077 PRMT6Q96LA8 375 aaPredicted RBP3.13□□□□□ -1.91
XRN1-206ENST00000467077 OR2A14Q96R47 310 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 NUDCD1Q96RS6 583 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 NCAPGQ9BPX3 1015 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 PSD2Q9BQI7 771 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 NYXQ9GZU5 481 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 SIX2Q9NPC8 291 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 CORO1CQ9ULV4 474 aaPredicted RBP3.13□□□□□ -1.91
XRN1-206ENST00000467077 USP16Q9Y5T5 823 aa3.13□□□□□ -1.91
XRN1-206ENST00000467077 LAMB1P07942 1786 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 SPEF2Q9C093 1822 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 PGPEP1LA6NFU8 196 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 TMEM189-UBE2V1I3L0A0 370 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 J3QR06 171 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 GPC4O75487 556 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 RARGP13631 454 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 CAPN2P17655 700 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 ITGA3P26006 1051 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 SNX16P57768 344 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 DCAF7P61962 342 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 UBE2V1Q13404 147 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 MEP1AQ16819 746 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 CRY2Q49AN0 593 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 RARS2Q5T160 578 aaKnown RBP3.12□□□□□ -1.91
XRN1-206ENST00000467077 ALS2CLQ60I27 953 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 TMEM198Q66K66 360 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 Q6ZVH6 145 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 ZNF534Q76KX8 674 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 GALNT13Q8IUC8 556 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 OMA1Q96E52 524 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 GAD1Q99259 594 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 SEMA6AQ9H2E6 1030 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 PLK3Q9H4B4 646 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 SH2D4AQ9H788 454 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 PANK3Q9H999 370 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 BLOC1S4Q9NUP1 217 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 TSPYL4Q9UJ04 414 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 LRRC37AA6NMS7 1700 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 SCN9AQ15858 1988 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 CDHR2Q9BYE9 1310 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 LAMA2P24043 3122 aaKnown RBP3.12□□□□□ -1.91
XRN1-206ENST00000467077 ECM29Q5VYK3 1845 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 ABCC12Q96J65 1359 aa3.12□□□□□ -1.91
XRN1-206ENST00000467077 TEX13DA0A0J9YY54 714 aaPredicted RBP3.11□□□□□ -1.91
XRN1-206ENST00000467077 FRMD3A2A2Y4 597 aa3.11□□□□□ -1.91
XRN1-206ENST00000467077 PI4KAP2A4QPH2 592 aa3.11□□□□□ -1.91
XRN1-206ENST00000467077 PLK4O00444 970 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms