RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ZFAND4Q86XD8 727 aa2.29□□□□□ -2.04
GTF3C3-209ENST00000466862 KRTAP11-1Q8IUC1 163 aa2.29□□□□□ -2.04
GTF3C3-209ENST00000466862 FBXO39Q8N4B4 442 aa2.29□□□□□ -2.04
GTF3C3-209ENST00000466862 UCMAQ8WVF2 138 aa2.29□□□□□ -2.04
GTF3C3-209ENST00000466862 C4orf45Q96LM5 186 aa2.29□□□□□ -2.04
GTF3C3-209ENST00000466862 URM1Q9BTM9 101 aaKnown RBP2.29□□□□□ -2.04
GTF3C3-209ENST00000466862 MAF1Q9H063 256 aa2.29□□□□□ -2.04
GTF3C3-209ENST00000466862 ABCB10Q9NRK6 738 aa2.29□□□□□ -2.04
GTF3C3-209ENST00000466862 SEPT11Q9NVA2 429 aaKnown RBP2.29□□□□□ -2.04
GTF3C3-209ENST00000466862 THAP10Q9P2Z0 257 aaPredicted RBP2.29□□□□□ -2.04
GTF3C3-209ENST00000466862 A0A087WUV0 522 aaPredicted RBP2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 LOC102723996A0A087X1L8 192 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 ASB14A6NK59 587 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 H0YAE9 185 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 FPGTO14772 594 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 PHOX2AO14813 284 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 KRT33AO76009 404 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 THEGLP0DJG4 465 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 TRIM21P19474 475 aaKnown RBP2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 MTHFRP42898 656 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 ZFP36L2P47974 494 aaKnown RBP2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 XGP55808 180 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 MTHFSDQ2M296 383 aaKnown RBP2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 UGT3A2Q3SY77 523 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 RAB41Q5JT25 222 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 SLC35D3Q5M8T2 416 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 TMPRSS11BQ86T26 416 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 PHC2Q8IXK0 858 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 MMD2Q8IY49 270 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 ZNF595Q8IYB9 648 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 CDK20Q8IZL9 346 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 CNRIP1Q96F85 164 aaPredicted RBP2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 ATXN7L3BQ96GX2 97 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 PDLIM5Q96HC4 596 aaKnown RBP2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 MS4A10Q96PG2 267 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 SPAG5Q96R06 1193 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 LGMNQ99538 433 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 PPANQ9NQ55 473 aaKnown RBP2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 KRT84Q9NSB2 600 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 IRAK4Q9NWZ3 460 aa2.28□□□□□ -2.04
GTF3C3-209ENST00000466862 TEX28O15482 410 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 ZWINTO95229 277 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 MELTFP08582 738 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 DANCRP0C864 163 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 TNFAIP3P21580 790 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 TSFMP43897 325 aaKnown RBP2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 LBX1P52954 281 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 HNRNPKP61978 463 aaKnown RBP eCLIP2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 DLK1P80370 383 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 CD300CQ08708 224 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 TAB1Q15750 504 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 RNASEH2BQ5TBB1 312 aaKnown RBP2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 ZNF841Q6ZN19 808 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 TTC39CQ8N584 583 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 PTPMT1Q8WUK0 201 aaPredicted RBP2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 SSMEM1Q8WWF3 244 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 PIGBQ92521 554 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 PAFAH2Q99487 392 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 TDRD1Q9BXT4 1180 aaKnown RBP2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 TUBB1Q9H4B7 451 aa2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 SUCLA2Q9P2R7 463 aaPredicted RBP2.27□□□□□ -2.05
GTF3C3-209ENST00000466862 IGHV4-30-2A0A087WSY4 118 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 SHISA9B4DS77 424 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 K7EQD1 137 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 EPHB6O15197 1021 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 MBD4O95243 580 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 JAK1P23458 1154 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 PIK3R1P27986 724 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 SLC9A3P48764 834 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 CLCN4P51793 760 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 CDH18Q13634 790 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 LCN1P1Q5VSP4 162 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 TMEM211Q6ICI0 200 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 CCDC70Q6NSX1 233 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 IL17RELQ6ZVW7 336 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 KBTBD6Q86V97 674 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 FAM131BQ86XD5 332 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 METTL4Q8N3J2 472 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 SUMF1Q8NBK3 374 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 TYMSOSQ8TAI1 123 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 TOMM40LQ969M1 308 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 CYYR1Q96J86 154 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 LPAR4Q99677 370 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 NKX3-1Q99801 234 aaPredicted RBP2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 FTOQ9C0B1 505 aaKnown RBP eCLIP2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 HOXD1Q9GZZ0 328 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 MIS12Q9H081 205 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 WNT5BQ9H1J7 359 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 Q9H8V8 135 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 EQTNQ9NQ60 294 aa2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 ZNF107Q9UII5 783 aaPredicted RBP2.26□□□□□ -2.05
GTF3C3-209ENST00000466862 TRBV5-5A0A0J9YX44 114 aa2.25□□□□□ -2.05
GTF3C3-209ENST00000466862 C2CD4DB7Z1M9 353 aa2.25□□□□□ -2.05
GTF3C3-209ENST00000466862 ADAMDEC1O15204 470 aa2.25□□□□□ -2.05
GTF3C3-209ENST00000466862 LRCH4O75427 683 aa2.25□□□□□ -2.05
GTF3C3-209ENST00000466862 NXPH4O95158 308 aa2.25□□□□□ -2.05
GTF3C3-209ENST00000466862 SMIM18P0DKX4 95 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms