RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 E2F2Q14209 437 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 MLF2Q15773 248 aaPredicted RBP20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 GALNT13Q8IUC8 556 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 LRRC56Q8IYG6 542 aaPredicted RBP20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 OR5K2Q8NHB8 316 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 SPAG4Q9NPE6 437 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 L3MBTL1Q9Y468 752 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 LRRC72A6NJI9 287 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 NPIPB8E9PQR5 432 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 H0Y3Z8 333 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 H0YIV9 168 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 KRT36O76013 467 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 PSMG1O95456 288 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 HOXC4P09017 264 aaPredicted RBP20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 JAK1P23458 1154 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 CASP2P42575 452 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 CEACAM7Q14002 265 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 ZNF423Q2M1K9 1284 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 Q6ZS52 159 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 PHC3Q8NDX5 983 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 HMGB4Q8WW32 186 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 NEIL2Q969S2 332 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 MAP10Q9P2G4 905 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 CROTQ9UKG9 612 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 PACSIN3Q9UKS6 424 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 KANSL1LA0AUZ9 987 aa20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 RPL10P27635 214 aaKnown RBP20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 IL12AP29459 219 aa20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 CLCNKAP51800 687 aa20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 KIAA0040Q15053 153 aa20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 PYCR3Q53H96 274 aa20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 CACHD1Q5VU97 1274 aa20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 LAYNQ6UX15 382 aa20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 WDR20Q8TBZ3 569 aa20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 SCARF2Q96GP6 870 aaPredicted RBP20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 CCDC177Q9NQR7 707 aaPredicted RBP20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 SUFUQ9UMX1 484 aa20.46■□□□□ 0.87
PPP1R3F-203ENST00000466508 DYTNA2CJ06 578 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 POM121BA6NF01 834 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 CCDC154A6NI56 674 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 KCNJ13O60928 360 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 EEDO75530 441 aaKnown RBP20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 NPPBP16860 134 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 KIAA1024LP59773 190 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 CSTF3Q12996 717 aaKnown RBP20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 RCN1Q15293 331 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 CAPRIN2Q6IMN6 1127 aaKnown RBP20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 ZNF852Q6ZMS4 543 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 SLCO4C1Q6ZQN7 724 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 VPS33AQ96AX1 596 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 OSGEPL1Q9H4B0 414 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 SGK2Q9HBY8 427 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 POLMQ9NP87 494 aaPredicted RBP20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 MRPL40Q9NQ50 206 aaKnown RBP20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 ADA2Q9NZK5 511 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 USP36Q9P275 1121 aaKnown RBP20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 DUSP12Q9UNI6 340 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 ASPDHA6ND91 283 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 PRR19A6NJB7 356 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 ERGP11308 486 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 ME2P23368 584 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 TSTA3Q13630 321 aaPredicted RBP20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 PTGR1Q14914 329 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 CCDC6Q16204 474 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 TMPRSS11BQ86T26 416 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 FLCNQ8NFG4 579 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 JADE3Q92613 823 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 CMTM7Q96FZ5 175 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 TRIT1Q9H3H1 467 aaKnown RBP20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 FGF22Q9HCT0 170 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 TDRKHQ9Y2W6 561 aaKnown RBP20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 DYRK1BQ9Y463 629 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 PCDHGA11Q9Y5H2 935 aa20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 CFAP20Q9Y6A4 193 aaKnown RBP20.45■□□□□ 0.86
PPP1R3F-203ENST00000466508 FPGTO14772 594 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 PI15O43692 258 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 CHRNB1P11230 501 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 IL9P15248 144 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 HNRNPA2B1P22626 353 aaKnown RBP20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 DGKEP52429 567 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 CLDN2P57739 230 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 ARHGAP19Q14CB8 494 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 TIGD2Q4W5G0 525 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 TMEM31Q5JXX7 168 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 SUSD1Q6UWL2 747 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 LIX1Q8N485 282 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 WDR34Q96EX3 536 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 IL17FQ96PD4 163 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 HOPXQ9BPY8 73 aaPredicted RBP20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 GPATCH1Q9BRR8 931 aaKnown RBP20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 SLC39A3Q9BRY0 314 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 GID8Q9NWU2 228 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 EBF1Q9UH73 591 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 MOSPD1Q9UJG1 213 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 LEF1Q9UJU2 399 aaPredicted RBP20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 KCNK6Q9Y257 313 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 WDR37Q9Y2I8 494 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 TMED5Q9Y3A6 229 aa20.44■□□□□ 0.86
PPP1R3F-203ENST00000466508 FXYD1O00168 92 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 LATO43561 262 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms