RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 GSDMDP57764 484 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 HERV-K104P61576 105 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 PHEXP78562 749 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 PPARDQ03181 441 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 KLC1Q07866 573 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 RASGEF1BQ0VAM2 473 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 TNK1Q13470 666 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 HERC3Q15034 1050 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 PTGISQ16647 500 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 ODF4Q2M2E3 257 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 TWISTNBQ3B726 338 aaPredicted RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 LACTB2Q53H82 288 aaPredicted RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 C1QTNF12Q5T7M4 302 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 C20orf194Q5TEA3 1177 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 STPG1Q5TH74 334 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 FAM72AQ5TYM5 149 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 SFMBT2Q5VUG0 894 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 KRT39Q6A163 491 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 FAM72DQ6L9T8 149 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 CAVIN1Q6NZI2 390 aaKnown RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 C11orf88Q6PI97 169 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 MOXD1Q6UVY6 613 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 NHLRC1Q6VVB1 395 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 C15orf39Q6ZRI6 1047 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 C11orf57Q6ZUT1 292 aaPredicted RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 USP43Q70EL4 1123 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 DNAJB7Q7Z6W7 309 aaPredicted RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 FAM72BQ86X60 149 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 FAM219AQ8IW50 185 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 CFAP206Q8IYR0 622 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 EID3Q8N140 333 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 OR8H3Q8N146 312 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 AMER3Q8N944 861 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 OR4K1Q8NGD4 311 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 OR10Q1Q8NGQ4 319 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 GOT1L1Q8NHS2 421 aaPredicted RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 SETD6Q8TBK2 473 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 GRAPLQ8TC17 118 aaPredicted RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 DNASE2BQ8WZ79 361 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 TM9SF4Q92544 642 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 NSMAFQ92636 917 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 P2RX5Q93086 422 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 MR1Q95460 341 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 ZNF501Q96CX3 271 aaPredicted RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 F2RL3Q96RI0 385 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 MAP3K3Q99759 626 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 RHNO1Q9BSD3 238 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 INPP5KQ9BT40 448 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 TRAF4Q9BUZ4 470 aaPredicted RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 MLPHQ9BV36 600 aaPredicted RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 MTMR12Q9C0I1 747 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 MIS12Q9H081 205 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 ACTL8Q9H568 366 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 LMAN1LQ9HAT1 526 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 UPF2Q9HAU5 1272 aaKnown RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 INTS9Q9NV88 658 aaKnown RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 WWOXQ9NZC7 414 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 CACNG4Q9UBN1 327 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 DNAJB9Q9UBS3 223 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 RASAL2Q9UJF2 1139 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 STUB1Q9UNE7 303 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 TMED3Q9Y3Q3 217 aa1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 GREB1LQ9C091 1923 aaPredicted RBP1.72□□□□□ -2.13
NUCKS1-202ENST00000464938 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TRBV5-5A0A0J9YX44 114 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 PMS2P5A8MQ11 134 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 FAM86B1E9PN63 330 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 H0Y626 953 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ARPC2O15144 300 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 PRAF2O60831 178 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 CDK2AP2O75956 126 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 DDHD2O94830 711 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 AP2A2O94973 939 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 EML2O95834 649 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 CLPTM1O96005 669 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 GSRP00390 522 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 APOHP02749 345 aaPredicted RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 EDN1P05305 212 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 PRSS1P07477 247 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 FAM86B2P0C5J1 330 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 PATE4P0C8F1 98 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 CFC1BP0CG36 223 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 CFC1P0CG37 223 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 FAM157CP0CG43 387 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TSPY3P0CV98 308 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TSPY8P0CW00 308 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 PDGFRAP16234 1089 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TLX1P31314 330 aaPredicted RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 WNT5AP41221 380 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 NKX2-1P43699 371 aaPredicted RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 CRKLP46109 303 aaKnown RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 CAPZA1P52907 286 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 MTCP1P56278 107 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 KRTAP10-5P60370 271 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 GNB1P62873 340 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TSPY1Q01534 308 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 GCNT1Q02742 428 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 GPR17Q13304 367 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TEAD2Q15562 447 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms