RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SARM1Q6SZW1 724 aa8.95□□□□□ -0.98
APP-213ENST00000464867 SPESP1Q6UW49 350 aa8.95□□□□□ -0.98
APP-213ENST00000464867 NLRP9Q7RTR0 991 aa8.95□□□□□ -0.98
APP-213ENST00000464867 AMIGO1Q86WK6 493 aa8.95□□□□□ -0.98
APP-213ENST00000464867 PSTKQ8IV42 348 aaKnown RBP8.95□□□□□ -0.98
APP-213ENST00000464867 P3H2Q8IVL5 708 aa8.95□□□□□ -0.98
APP-213ENST00000464867 TEX26Q8N6G2 289 aa8.95□□□□□ -0.98
APP-213ENST00000464867 RASGEF1AQ8N9B8 481 aa8.95□□□□□ -0.98
APP-213ENST00000464867 MIEF2Q96C03 454 aa8.95□□□□□ -0.98
APP-213ENST00000464867 C8orf44Q96CB5 159 aa8.95□□□□□ -0.98
APP-213ENST00000464867 RBM41Q96IZ5 413 aaKnown RBP8.95□□□□□ -0.98
APP-213ENST00000464867 TRIM51Q9BSJ1 452 aa8.95□□□□□ -0.98
APP-213ENST00000464867 CCM2Q9BSQ5 444 aa8.95□□□□□ -0.98
APP-213ENST00000464867 GOLPH3LQ9H4A5 285 aa8.95□□□□□ -0.98
APP-213ENST00000464867 KLHL1Q9NR64 748 aa8.95□□□□□ -0.98
APP-213ENST00000464867 RIC8BQ9NVN3 520 aa8.95□□□□□ -0.98
APP-213ENST00000464867 BEX4Q9NWD9 120 aaPredicted RBP8.95□□□□□ -0.98
APP-213ENST00000464867 CWC15Q9P013 229 aaKnown RBP8.95□□□□□ -0.98
APP-213ENST00000464867 FAM8A1Q9UBU6 413 aa8.95□□□□□ -0.98
APP-213ENST00000464867 PCSK1NQ9UHG2 260 aa8.95□□□□□ -0.98
APP-213ENST00000464867 AMACRQ9UHK6 382 aa8.95□□□□□ -0.98
APP-213ENST00000464867 FOXD3Q9UJU5 478 aaPredicted RBP8.95□□□□□ -0.98
APP-213ENST00000464867 SHOC2Q9UQ13 582 aa8.95□□□□□ -0.98
APP-213ENST00000464867 ZANQ9Y493 2812 aa8.95□□□□□ -0.98
APP-213ENST00000464867 PHF3Q92576 2039 aaKnown RBP8.94□□□□□ -0.98
APP-213ENST00000464867 ASPDHA6ND91 283 aa8.94□□□□□ -0.98
APP-213ENST00000464867 MGAT4DA6NG13 374 aa8.94□□□□□ -0.98
APP-213ENST00000464867 H7C1Q1 480 aa8.94□□□□□ -0.98
APP-213ENST00000464867 RASGRF2O14827 1237 aa8.94□□□□□ -0.98
APP-213ENST00000464867 DSCR3O14972 297 aa8.94□□□□□ -0.98
APP-213ENST00000464867 ZNHIT1O43257 154 aa8.94□□□□□ -0.98
APP-213ENST00000464867 CRLF1O75462 422 aa8.94□□□□□ -0.98
APP-213ENST00000464867 RNF8O76064 485 aa8.94□□□□□ -0.98
APP-213ENST00000464867 POLBP06746 335 aa8.94□□□□□ -0.98
APP-213ENST00000464867 UGT1A1P22309 533 aa8.94□□□□□ -0.98
APP-213ENST00000464867 SSTR4P31391 388 aa8.94□□□□□ -0.98
APP-213ENST00000464867 RPL7AP62424 266 aaKnown RBP8.94□□□□□ -0.98
APP-213ENST00000464867 FANCCQ00597 558 aa8.94□□□□□ -0.98
APP-213ENST00000464867 HSF1Q00613 529 aa8.94□□□□□ -0.98
APP-213ENST00000464867 KLC1Q07866 573 aa8.94□□□□□ -0.98
APP-213ENST00000464867 DPYSQ14117 519 aa8.94□□□□□ -0.98
APP-213ENST00000464867 LONRF2Q1L5Z9 754 aa8.94□□□□□ -0.98
APP-213ENST00000464867 ATP13A5Q4VNC0 1218 aa8.94□□□□□ -0.98
APP-213ENST00000464867 FNBP1LQ5T0N5 605 aa8.94□□□□□ -0.98
APP-213ENST00000464867 YOD1Q5VVQ6 348 aaPredicted RBP8.94□□□□□ -0.98
APP-213ENST00000464867 ALKBH2Q6NS38 261 aa8.94□□□□□ -0.98
APP-213ENST00000464867 TIGD7Q6NT04 549 aaPredicted RBP8.94□□□□□ -0.98
APP-213ENST00000464867 NEK10Q6ZWH5 1172 aa8.94□□□□□ -0.98
APP-213ENST00000464867 TMC3Q7Z5M5 1100 aa8.94□□□□□ -0.98
APP-213ENST00000464867 LRRC49Q8IUZ0 686 aa8.94□□□□□ -0.98
APP-213ENST00000464867 CCDC71Q8IV32 467 aaPredicted RBP8.94□□□□□ -0.98
APP-213ENST00000464867 HORMAD2Q8N7B1 307 aa8.94□□□□□ -0.98
APP-213ENST00000464867 FAM57AQ8TBR7 257 aa8.94□□□□□ -0.98
APP-213ENST00000464867 UTP4Q969X6 686 aaKnown RBP8.94□□□□□ -0.98
APP-213ENST00000464867 EID2BQ96D98 161 aa8.94□□□□□ -0.98
APP-213ENST00000464867 SNRNP25Q9BV90 132 aaKnown RBP8.94□□□□□ -0.98
APP-213ENST00000464867 SARGQ9BW04 601 aa8.94□□□□□ -0.98
APP-213ENST00000464867 TP63Q9H3D4 680 aaPredicted RBP8.94□□□□□ -0.98
APP-213ENST00000464867 TFB2MQ9H5Q4 396 aaKnown RBP8.94□□□□□ -0.98
APP-213ENST00000464867 MAGEE1Q9HCI5 957 aa8.94□□□□□ -0.98
APP-213ENST00000464867 RBM22Q9NW64 420 aaKnown RBP eCLIP8.94□□□□□ -0.98
APP-213ENST00000464867 CTSFQ9UBX1 484 aa8.94□□□□□ -0.98
APP-213ENST00000464867 C3orf18Q9UK00 162 aa8.94□□□□□ -0.98
APP-213ENST00000464867 ASB1Q9Y576 335 aa8.94□□□□□ -0.98
APP-213ENST00000464867 VSTM2BA6NLU5 285 aa8.93□□□□□ -0.98
APP-213ENST00000464867 A6NNC1 897 aa8.93□□□□□ -0.98
APP-213ENST00000464867 A8MUI8 341 aa8.93□□□□□ -0.98
APP-213ENST00000464867 IFRD1O00458 451 aaPredicted RBP8.93□□□□□ -0.98
APP-213ENST00000464867 HCRTR1O43613 425 aa8.93□□□□□ -0.98
APP-213ENST00000464867 MED26O95402 600 aa8.93□□□□□ -0.98
APP-213ENST00000464867 IGLV1-40P01703 118 aa8.93□□□□□ -0.98
APP-213ENST00000464867 HSP90AA1P07900 732 aaKnown RBP8.93□□□□□ -0.98
APP-213ENST00000464867 COX6A1P12074 109 aa8.93□□□□□ -0.98
APP-213ENST00000464867 ZNF24P17028 368 aa8.93□□□□□ -0.98
APP-213ENST00000464867 MSH3P20585 1137 aa8.93□□□□□ -0.98
APP-213ENST00000464867 PSMA2P25787 234 aa8.93□□□□□ -0.98
APP-213ENST00000464867 AKT1P31749 480 aa8.93□□□□□ -0.98
APP-213ENST00000464867 MTIF2P46199 727 aaKnown RBP8.93□□□□□ -0.98
APP-213ENST00000464867 OR1D4P47884 311 aa8.93□□□□□ -0.98
APP-213ENST00000464867 DCAF7P61962 342 aa8.93□□□□□ -0.98
APP-213ENST00000464867 PMPCAQ10713 525 aa8.93□□□□□ -0.98
APP-213ENST00000464867 PTP4A2Q12974 167 aa8.93□□□□□ -0.98
APP-213ENST00000464867 GRM7Q14831 915 aa8.93□□□□□ -0.98
APP-213ENST00000464867 PPP2R5EQ16537 467 aa8.93□□□□□ -0.98
APP-213ENST00000464867 FAM214AQ32MH5 1076 aa8.93□□□□□ -0.98
APP-213ENST00000464867 ALG1LQ6GMV1 187 aa8.93□□□□□ -0.98
APP-213ENST00000464867 CCDC70Q6NSX1 233 aa8.93□□□□□ -0.98
APP-213ENST00000464867 ZNF449Q6P9G9 518 aa8.93□□□□□ -0.98
APP-213ENST00000464867 VN1R5Q7Z5H4 357 aa8.93□□□□□ -0.98
APP-213ENST00000464867 PHF13Q86YI8 300 aaPredicted RBP8.93□□□□□ -0.98
APP-213ENST00000464867 PRSS58Q8IYP2 241 aa8.93□□□□□ -0.98
APP-213ENST00000464867 CFAP206Q8IYR0 622 aa8.93□□□□□ -0.98
APP-213ENST00000464867 TTC29Q8NA56 475 aaPredicted RBP8.93□□□□□ -0.98
APP-213ENST00000464867 OR10Q1Q8NGQ4 319 aa8.93□□□□□ -0.98
APP-213ENST00000464867 OR2L2Q8NH16 312 aa8.93□□□□□ -0.98
APP-213ENST00000464867 ZNF354BQ96LW1 612 aa8.93□□□□□ -0.98
APP-213ENST00000464867 FRMD6Q96NE9 622 aa8.93□□□□□ -0.98
APP-213ENST00000464867 SRPK1Q96SB4 655 aaKnown RBP8.93□□□□□ -0.98
APP-213ENST00000464867 UTP23Q9BRU9 249 aaKnown RBP8.93□□□□□ -0.98
APP-213ENST00000464867 STK33Q9BYT3 514 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms