RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 GALNT11Q8NCW6 608 aa19.69■□□□□ 0.74
PDLIM4-205ENST00000463615 SKA2Q8WVK7 121 aaPredicted RBP19.69■□□□□ 0.74
PDLIM4-205ENST00000463615 SERPINB12Q96P63 405 aa19.69■□□□□ 0.74
PDLIM4-205ENST00000463615 CUTCQ9NTM9 273 aa19.69■□□□□ 0.74
PDLIM4-205ENST00000463615 IRAK4Q9NWZ3 460 aa19.69■□□□□ 0.74
PDLIM4-205ENST00000463615 P4HTMQ9NXG6 502 aa19.69■□□□□ 0.74
PDLIM4-205ENST00000463615 SAMD15Q9P1V8 674 aa19.69■□□□□ 0.74
PDLIM4-205ENST00000463615 RUVBL2Q9Y230 463 aaKnown RBP19.69■□□□□ 0.74
PDLIM4-205ENST00000463615 CRYL1Q9Y2S2 319 aa19.69■□□□□ 0.74
PDLIM4-205ENST00000463615 MAP4K5Q9Y4K4 846 aa19.69■□□□□ 0.74
PDLIM4-205ENST00000463615 DOPEY2Q9Y3R5 2298 aa19.69■□□□□ 0.74
PDLIM4-205ENST00000463615 RP1L1Q8IWN7 2480 aaPredicted RBP19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 OR2A25A4D2G3 310 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 TTLL8A6PVC2 850 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 PEX12O00623 359 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 CHRM3P20309 590 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 CLCN7P51798 805 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 DHX34Q14147 1143 aaKnown RBP19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 FAM214AQ32MH5 1076 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 VWA5B1Q5TIE3 1220 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 CCDC137Q6PK04 289 aaKnown RBP19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 IGFL3Q6UXB1 125 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 RNF44Q7L0R7 432 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 OR9A1PQ8NGU1 263 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 ACTRT1Q8TDG2 376 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 MS4A14Q96JA4 679 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 SELENOSQ9BQE4 189 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 ANKMY1Q9P2S6 941 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 GALPQ9UBC7 116 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 MED16Q9Y2X0 877 aa19.68■□□□□ 0.74
PDLIM4-205ENST00000463615 USP9XQ93008 2570 aaPredicted RBP19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 ARHGEF33A8MVX0 844 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 PGRMC1O00264 195 aaKnown RBP19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 CES2O00748 559 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 PHF2O75151 1096 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 USP1O94782 785 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 ALAS2P22557 587 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 MMP11P24347 488 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 HSD17B2P37059 387 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 FNTAP49354 379 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 EMP3P54852 163 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 SRSF1Q07955 248 aaKnown RBP eCLIP19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 MYBPC3Q14896 1274 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 KCTD19Q17RG1 926 aaPredicted RBP19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 ACSBG2Q5FVE4 666 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 JMJD6Q6NYC1 403 aaPredicted RBP19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 CASC4Q6P4E1 433 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 COX15Q7KZN9 410 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 RBMXL3Q8N7X1 1067 aaKnown RBP19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 NAT8LQ8N9F0 302 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 TTC29Q8NA56 475 aaPredicted RBP19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 CLEC1AQ8NC01 280 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 CPT1CQ8TCG5 803 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 KCNJ9Q92806 393 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 PNPLA2Q96AD5 504 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 SPSB2Q99619 263 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 TRIM56Q9BRZ2 755 aaKnown RBP19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 FAM114A2Q9NRY5 505 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 NXT1Q9UKK6 140 aaKnown RBP19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 FAM169AQ9Y6X4 670 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 PCM1Q15154 2024 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 CCDC88CQ9P219 2028 aa19.67■□□□□ 0.74
PDLIM4-205ENST00000463615 AGPSO00116 658 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 MCM3P25205 808 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 VARSP26640 1264 aaKnown RBP19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 PSMB5P28074 263 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 RELAQ04206 551 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 NKG7Q16617 165 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 KLHL38Q2WGJ6 581 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 TTLL9Q3SXZ7 439 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 WASHC2DQ5SRD0 308 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 ZNF470Q6ECI4 717 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 REXO1L1PQ8IX06 675 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 GALNT16Q8N428 558 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 FAM26EQ8N5C1 309 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 Q8NA96 180 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 SMPDL3AQ92484 453 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 ZNF669Q96BR6 464 aaPredicted RBP19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 SIGLEC10Q96LC7 697 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 MIPEPQ99797 713 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 COMMD10Q9Y6G5 202 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 MAST4O15021 2626 aa19.66■□□□□ 0.74
PDLIM4-205ENST00000463615 KRT87PA6NCN2 255 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 A6NL46 340 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 VSTM2BA6NLU5 285 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 E5RI56 91 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 CATP04040 527 aaKnown RBP19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 CMPK1P30085 196 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 THOC5Q13769 683 aaKnown RBP19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 FASTKQ14296 549 aaKnown RBP19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 SLC9A5Q14940 896 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 SLC6A19Q695T7 634 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 PRMT9Q6P2P2 845 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 AGGF1Q8N302 714 aaeCLIP19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 EFCAB3Q8N7B9 438 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 CALML6Q8TD86 181 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 GRK7Q8WTQ7 553 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 OSBPL9Q96SU4 736 aa19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 ZFYVE21Q9BQ24 234 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms