RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ABHD18Q0P651 414 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 CHIT1Q13231 466 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 GTF2H3Q13889 308 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 GGTA1PQ4G0N0 100 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 PRAMEF9Q5VWM5 478 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 FRG2Q64ET8 278 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 ANKRD26P1Q6NSI1 321 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 NOXRED1Q6NXP6 359 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 FKBP9P1Q75LS8 142 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 CHST14Q8NCH0 376 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 CNDP2Q96KP4 475 aaKnown RBP16.46■□□□□ 0.23
ACTB-207ENST00000462494 CAPNS2Q96L46 248 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 FRG2BQ96QU4 278 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 CCDC90BQ9GZT6 254 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 DNAJC11Q9NVH1 559 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 KLHL42Q9P2K6 505 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 SLCO3A1Q9UIG8 710 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 BLOC1S6Q9UL45 172 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 TRAV19A0A0A6YYK7 116 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 EVPLLA8MZ36 301 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 MYO1GB0I1T2 1018 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 MITFO75030 526 aaPredicted RBP16.46■□□□□ 0.23
ACTB-207ENST00000462494 AMD1P17707 334 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 KIR3DL1P43629 444 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 PLA2G16P53816 162 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 ZCCHC8Q6NZY4 707 aaKnown RBP16.46■□□□□ 0.23
ACTB-207ENST00000462494 Q6ZVU0 165 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 ZNF551Q7Z340 670 aaPredicted RBP16.46■□□□□ 0.23
ACTB-207ENST00000462494 GALNT10Q86SR1 603 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 HIPK1Q86Z02 1210 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 DCP2Q8IU60 420 aaKnown RBP16.46■□□□□ 0.23
ACTB-207ENST00000462494 FAM9CQ8IZT9 166 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 OR7A2PQ8NGA2 310 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 MCOLN3Q8TDD5 553 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 ELMO1Q92556 727 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 SCAMP4Q969E2 229 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 TESCQ96BS2 214 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 PANX1Q96RD7 426 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 THG1LQ9NWX6 298 aaKnown RBP16.46■□□□□ 0.23
ACTB-207ENST00000462494 VNN3Q9NY84 501 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 SPG21Q9NZD8 308 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 PLXNB3Q9ULL4 1909 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 OBSL1O75147 1896 aa16.46■□□□□ 0.22
ACTB-207ENST00000462494 IGLV3-16A0A075B6K0 115 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 SH3PXD2BA1X283 911 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 NUAK1O60285 661 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 LRG1P02750 347 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 HTR1AP08908 422 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 TFPTP0C1Z6 253 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 NR4A1P22736 598 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 SLC7A9P82251 487 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 IL5RAQ01344 420 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 DDX39BQ13838 428 aaKnown RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 SF1Q15637 639 aaKnown RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 CARD16Q5EG05 197 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 TTC23LQ6PF05 361 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 SYT12Q8IV01 421 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 L3MBTL4Q8NA19 623 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 MYLIPQ8WY64 445 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 NELL1Q92832 810 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 DEFB118Q96PH6 123 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 MCCC1Q96RQ3 725 aaPredicted RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 REXO4Q9GZR2 422 aaKnown RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 TMEFF2Q9UIK5 374 aaPredicted RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 SLC25A13Q9UJS0 675 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 TMED5Q9Y3A6 229 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 SNX5Q9Y5X3 404 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 NUP214P35658 2090 aaPredicted RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 MYOFQ9NZM1 2061 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 FPGTO14772 594 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 BCKDKO14874 412 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 TGM5O43548 720 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 POP4O95707 220 aaKnown RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 BCL10O95999 233 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 CYP4B1P13584 511 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 HOXB9P17482 250 aaPredicted RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 RAD23AP54725 363 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 ISL1P61371 349 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 TUBA3CQ13748 450 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 ZNF648Q5T619 568 aaPredicted RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 ZNF691Q5VV52 312 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 ZNF621Q6ZSS3 439 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 DDX53Q86TM3 631 aaKnown RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 HOMEZQ8IX15 550 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 CNIH3Q8TBE1 160 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 LZICQ8WZA0 190 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 TANKQ92844 425 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 MAGED4Q96JG8 741 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 BARD1Q99728 777 aaKnown RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 TBC1D23Q9NUY8 699 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 ABCG2Q9UNQ0 655 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 SAMD4AQ9UPU9 718 aaKnown RBP16.45■□□□□ 0.22
ACTB-207ENST00000462494 HS3ST2Q9Y278 367 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 PPIL1Q9Y3C6 166 aa16.45■□□□□ 0.22
ACTB-207ENST00000462494 TRIM64BA6NI03 449 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 OR2AG2A6NM03 316 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 EIF3FO00303 357 aaPredicted RBP16.44■□□□□ 0.22
ACTB-207ENST00000462494 SLC1A7O00341 560 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 SH3BGRLO75368 114 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 DIRAS1O95057 198 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms