RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SLC13A5Q86YT5 568 aaPredicted RBP14.73□□□□□ -0.05
SKA3-204ENST00000462482 METTL27Q8N6F8 245 aaPredicted RBP14.73□□□□□ -0.05
SKA3-204ENST00000462482 LKAAEAR1Q8TD35 194 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 C1orf54Q8WWF1 131 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 MIEF2Q96C03 454 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 THOC3Q96J01 351 aaKnown RBP14.73□□□□□ -0.05
SKA3-204ENST00000462482 MIPEPQ99797 713 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 DESI2Q9BSY9 194 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 MENTQ9BUN1 341 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 TSGA10Q9BZW7 698 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 ZBTB20Q9HC78 741 aaPredicted RBP14.73□□□□□ -0.05
SKA3-204ENST00000462482 CHRAC1Q9NRG0 131 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 CTSFQ9UBX1 484 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 ZNF282Q9UDV7 671 aaPredicted RBP14.73□□□□□ -0.05
SKA3-204ENST00000462482 HS3ST3B1Q9Y662 390 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 NOTCH2Q04721 2471 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 FITM1A5D6W6 292 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 ENO4A6NNW6 628 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 GOLGA6L6A8MZA4 724 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 MAP2K7O14733 419 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 PRPF4O43172 522 aaKnown RBP eCLIP14.72□□□□□ -0.05
SKA3-204ENST00000462482 ALOX12BO75342 701 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 C1orf105O95561 183 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 ACPPP15309 386 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 CMPK1P30085 196 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 NPY2RP49146 381 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 EIF3BP55884 814 aaKnown RBP14.72□□□□□ -0.05
SKA3-204ENST00000462482 MUM1Q2TAK8 710 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 CRB2Q5IJ48 1285 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 MRNIPQ6NTE8 343 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 FAM180AQ6UWF9 173 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 KIRREL2Q6UWL6 708 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 ISLR2Q6UXK2 745 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 COX15Q7KZN9 410 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 GSTA5Q7RTV2 222 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.72□□□□□ -0.05
SKA3-204ENST00000462482 INPP5DQ92835 1189 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 ZNF285Q96NJ3 590 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 IL22Q9GZX6 179 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 UTP6Q9NYH9 597 aaKnown RBP14.72□□□□□ -0.05
SKA3-204ENST00000462482 SPATA7Q9P0W8 599 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 MARCH4Q9P2E8 410 aaPredicted RBP14.72□□□□□ -0.05
SKA3-204ENST00000462482 ZC3H7BQ9UGR2 993 aaKnown RBP14.72□□□□□ -0.05
SKA3-204ENST00000462482 CDC14AQ9UNH5 594 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 MAU2Q9Y6X3 613 aa14.72□□□□□ -0.05
SKA3-204ENST00000462482 TNRC6AQ8NDV7 1962 aaKnown RBP14.72□□□□□ -0.05
SKA3-204ENST00000462482 A0A0J9YVX5 310 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 H3BMM5 538 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 VPS26AO75436 327 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 CLDN1O95832 211 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 HPP00738 406 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 ETS1P14921 441 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 FBLP22087 321 aaKnown RBP14.71□□□□□ -0.05
SKA3-204ENST00000462482 RPS3P23396 243 aaKnown RBP eCLIP14.71□□□□□ -0.05
SKA3-204ENST00000462482 CXCR2P25025 360 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 COL8A1P27658 744 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 DCTP40126 519 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 BDKRB1P46663 353 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 BASP1P80723 227 aaKnown RBP14.71□□□□□ -0.05
SKA3-204ENST00000462482 RNF187Q5TA31 235 aaPredicted RBP14.71□□□□□ -0.05
SKA3-204ENST00000462482 ZNF787Q6DD87 383 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 CNSTQ6PJW8 725 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 IGFL2Q6UWQ7 119 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 LINC00696Q6ZRV3 163 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 KCNMB4Q86W47 210 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 KBTBD2Q8IY47 623 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 PRSS58Q8IYP2 241 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 OR2L3Q8NG85 312 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 OR11G2Q8NGC1 345 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 HMGCLL1Q8TB92 370 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 STT3BQ8TCJ2 826 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 GRHL3Q8TE85 626 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 CABS1Q96KC9 395 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 BARD1Q99728 777 aaKnown RBP14.71□□□□□ -0.05
SKA3-204ENST00000462482 ZFYVE21Q9BQ24 234 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 YIPF2Q9BWQ6 316 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 P2RY12Q9H244 342 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 EIF2B3Q9NR50 452 aaKnown RBP14.71□□□□□ -0.05
SKA3-204ENST00000462482 ENAMQ9NRM1 1142 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 C3orf18Q9UK00 162 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 DRG1Q9Y295 367 aaKnown RBP14.71□□□□□ -0.05
SKA3-204ENST00000462482 NTNG1Q9Y2I2 539 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 CAPN6Q9Y6Q1 641 aa14.71□□□□□ -0.05
SKA3-204ENST00000462482 SPTBN1Q01082 2364 aaKnown RBP14.71□□□□□ -0.05
SKA3-204ENST00000462482 DYTNA2CJ06 578 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 VSTM2BA6NLU5 285 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 ZNF839A8K0R7 811 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 CTSVO60911 334 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 PHF2O75151 1096 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 USP1O94782 785 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 EDN3P14138 238 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 RPA3P35244 121 aaPredicted RBP14.7□□□□□ -0.06
SKA3-204ENST00000462482 MFAP5Q13361 173 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 RPS6KA1Q15418 735 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 PRUNE1Q86TP1 453 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 FAR1Q8WVX9 515 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 MAIP1Q8WWC4 291 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 LMF1Q96S06 567 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 FAM114A2Q9NRY5 505 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 GUCA1BQ9UMX6 200 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms