RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 ZDHHC3Q9NYG2 299 aa14.51□□□□□ -0.09
APP-211ENST00000462267 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.51□□□□□ -0.09
APP-211ENST00000462267 LOC102723996A0A087X1L8 192 aa14.5□□□□□ -0.09
APP-211ENST00000462267 EEF1DP29692 281 aaKnown RBP14.5□□□□□ -0.09
APP-211ENST00000462267 SKOR2Q2VWA4 1001 aaPredicted RBP14.5□□□□□ -0.09
APP-211ENST00000462267 GPR33Q49SQ1 333 aa14.5□□□□□ -0.09
APP-211ENST00000462267 ARHGEF18Q6ZSZ5 1173 aa14.5□□□□□ -0.09
APP-211ENST00000462267 CHERPQ8IWX8 916 aaKnown RBP14.5□□□□□ -0.09
APP-211ENST00000462267 LILRB4Q8NHJ6 448 aa14.5□□□□□ -0.09
APP-211ENST00000462267 FRMD6Q96NE9 622 aa14.5□□□□□ -0.09
APP-211ENST00000462267 ALPK1Q96QP1 1244 aa14.5□□□□□ -0.09
APP-211ENST00000462267 C19orf43Q9BQ61 176 aa14.5□□□□□ -0.09
APP-211ENST00000462267 FSD1LQ9BXM9 530 aa14.5□□□□□ -0.09
APP-211ENST00000462267 FAM96AQ9H5X1 160 aa14.5□□□□□ -0.09
APP-211ENST00000462267 KCNJ16Q9NPI9 418 aa14.5□□□□□ -0.09
APP-211ENST00000462267 C14orf105Q9NVL8 296 aa14.5□□□□□ -0.09
APP-211ENST00000462267 ST6GALNAC2Q9UJ37 374 aa14.5□□□□□ -0.09
APP-211ENST00000462267 PLAGL1Q9UM63 463 aa14.5□□□□□ -0.09
APP-211ENST00000462267 EDARQ9UNE0 448 aa14.5□□□□□ -0.09
APP-211ENST00000462267 RCCD1A6NED2 376 aa14.49□□□□□ -0.09
APP-211ENST00000462267 TOXO94900 526 aa14.49□□□□□ -0.09
APP-211ENST00000462267 S1PR4O95977 384 aa14.49□□□□□ -0.09
APP-211ENST00000462267 FBLP22087 321 aaKnown RBP14.49□□□□□ -0.09
APP-211ENST00000462267 PKLRP30613 574 aa14.49□□□□□ -0.09
APP-211ENST00000462267 CHRNB4P30926 498 aa14.49□□□□□ -0.09
APP-211ENST00000462267 VSX2P58304 361 aaPredicted RBP14.49□□□□□ -0.09
APP-211ENST00000462267 MYL5Q02045 173 aa14.49□□□□□ -0.09
APP-211ENST00000462267 WASHC5Q12768 1159 aa14.49□□□□□ -0.09
APP-211ENST00000462267 MYBPHQ13203 477 aa14.49□□□□□ -0.09
APP-211ENST00000462267 CLDN19Q8N6F1 224 aa14.49□□□□□ -0.09
APP-211ENST00000462267 MDS2Q8NDY4 140 aa14.49□□□□□ -0.09
APP-211ENST00000462267 SPATA3Q8NHX4 192 aa14.49□□□□□ -0.09
APP-211ENST00000462267 ZUFSPQ96AP4 578 aa14.49□□□□□ -0.09
APP-211ENST00000462267 SCMH1Q96GD3 660 aa14.49□□□□□ -0.09
APP-211ENST00000462267 IMMP1LQ96LU5 166 aa14.49□□□□□ -0.09
APP-211ENST00000462267 ZNF354BQ96LW1 612 aa14.49□□□□□ -0.09
APP-211ENST00000462267 TUBB6Q9BUF5 446 aa14.49□□□□□ -0.09
APP-211ENST00000462267 FICDQ9BVA6 458 aa14.49□□□□□ -0.09
APP-211ENST00000462267 KLHL1Q9NR64 748 aa14.49□□□□□ -0.09
APP-211ENST00000462267 DNAJB12Q9NXW2 375 aaKnown RBP14.49□□□□□ -0.09
APP-211ENST00000462267 LCMT1Q9UIC8 334 aa14.49□□□□□ -0.09
APP-211ENST00000462267 LUC7L2Q9Y383 392 aaKnown RBP14.49□□□□□ -0.09
APP-211ENST00000462267 HCFC1P51610 2035 aa14.48□□□□□ -0.09
APP-211ENST00000462267 C3orf70A6NLC5 250 aaPredicted RBP14.48□□□□□ -0.09
APP-211ENST00000462267 A8MUI8 341 aa14.48□□□□□ -0.09
APP-211ENST00000462267 TARM1B6A8C7 271 aa14.48□□□□□ -0.09
APP-211ENST00000462267 BHMG1C9JSJ3 638 aaPredicted RBP14.48□□□□□ -0.09
APP-211ENST00000462267 RASGRF2O14827 1237 aa14.48□□□□□ -0.09
APP-211ENST00000462267 AP2A2O94973 939 aa14.48□□□□□ -0.09
APP-211ENST00000462267 FKBP9O95302 570 aa14.48□□□□□ -0.09
APP-211ENST00000462267 MED26O95402 600 aa14.48□□□□□ -0.09
APP-211ENST00000462267 CRTAMO95727 393 aa14.48□□□□□ -0.09
APP-211ENST00000462267 HEXBP07686 556 aa14.48□□□□□ -0.09
APP-211ENST00000462267 CD46P15529 392 aa14.48□□□□□ -0.09
APP-211ENST00000462267 ACRV1P26436 265 aa14.48□□□□□ -0.09
APP-211ENST00000462267 ADAM8P78325 824 aa14.48□□□□□ -0.09
APP-211ENST00000462267 MUM1Q2TAK8 710 aa14.48□□□□□ -0.09
APP-211ENST00000462267 TMEM211Q6ICI0 200 aa14.48□□□□□ -0.09
APP-211ENST00000462267 BZW1Q7L1Q6 419 aaKnown RBP14.48□□□□□ -0.09
APP-211ENST00000462267 PID1Q7Z2X4 250 aa14.48□□□□□ -0.09
APP-211ENST00000462267 LINC01555Q8NAE3 123 aa14.48□□□□□ -0.09
APP-211ENST00000462267 TMEM178AQ8NBL3 297 aa14.48□□□□□ -0.09
APP-211ENST00000462267 FAM98AQ8NCA5 519 aaKnown RBP14.48□□□□□ -0.09
APP-211ENST00000462267 TFB1MQ8WVM0 346 aaKnown RBP14.48□□□□□ -0.09
APP-211ENST00000462267 VAT1Q99536 393 aa14.48□□□□□ -0.09
APP-211ENST00000462267 KLHL8Q9P2G9 620 aaPredicted RBP14.48□□□□□ -0.09
APP-211ENST00000462267 CDC14AQ9UNH5 594 aa14.48□□□□□ -0.09
APP-211ENST00000462267 ASB1Q9Y576 335 aa14.48□□□□□ -0.09
APP-211ENST00000462267 BZW2Q9Y6E2 419 aaKnown RBP14.48□□□□□ -0.09
APP-211ENST00000462267 FAM169AQ9Y6X4 670 aa14.48□□□□□ -0.09
APP-211ENST00000462267 TRBV5-4A0A0C4DH59 114 aa14.47□□□□□ -0.09
APP-211ENST00000462267 NKX2-6A6NCS4 301 aa14.47□□□□□ -0.09
APP-211ENST00000462267 FAM90A27PA6NNH2 459 aa14.47□□□□□ -0.09
APP-211ENST00000462267 PRPF4O43172 522 aaKnown RBP eCLIP14.47□□□□□ -0.09
APP-211ENST00000462267 ZNHIT1O43257 154 aa14.47□□□□□ -0.09
APP-211ENST00000462267 AGTP01019 485 aa14.47□□□□□ -0.09
APP-211ENST00000462267 CD9P21926 228 aa14.47□□□□□ -0.09
APP-211ENST00000462267 DNASE1P24855 282 aa14.47□□□□□ -0.09
APP-211ENST00000462267 NR2C2P49116 596 aa14.47□□□□□ -0.09
APP-211ENST00000462267 HSF1Q00613 529 aa14.47□□□□□ -0.09
APP-211ENST00000462267 PLOD1Q02809 727 aaPredicted RBP14.47□□□□□ -0.09
APP-211ENST00000462267 TUBA3CQ13748 450 aa14.47□□□□□ -0.09
APP-211ENST00000462267 OR1C1Q15619 314 aa14.47□□□□□ -0.09
APP-211ENST00000462267 SF1Q15637 639 aaKnown RBP14.47□□□□□ -0.09
APP-211ENST00000462267 ACER2Q5QJU3 275 aa14.47□□□□□ -0.09
APP-211ENST00000462267 TUBA3EQ6PEY2 450 aa14.47□□□□□ -0.09
APP-211ENST00000462267 TMEM205Q6UW68 189 aa14.47□□□□□ -0.09
APP-211ENST00000462267 CEP128Q6ZU80 1094 aa14.47□□□□□ -0.09
APP-211ENST00000462267 SERPINA9Q86WD7 417 aa14.47□□□□□ -0.09
APP-211ENST00000462267 TMTC1Q8IUR5 882 aa14.47□□□□□ -0.09
APP-211ENST00000462267 BEST3Q8N1M1 668 aa14.47□□□□□ -0.09
APP-211ENST00000462267 OR13C4Q8NGS5 318 aa14.47□□□□□ -0.09
APP-211ENST00000462267 ELMO1Q92556 727 aa14.47□□□□□ -0.09
APP-211ENST00000462267 SIGLEC12Q96PQ1 595 aa14.47□□□□□ -0.09
APP-211ENST00000462267 UTP23Q9BRU9 249 aaKnown RBP14.47□□□□□ -0.09
APP-211ENST00000462267 HES7Q9BYE0 225 aa14.47□□□□□ -0.09
APP-211ENST00000462267 UCK2Q9BZX2 261 aa14.47□□□□□ -0.09
APP-211ENST00000462267 TGIF2Q9GZN2 237 aa14.47□□□□□ -0.09
APP-211ENST00000462267 TRPC4Q9UBN4 977 aa14.47□□□□□ -0.09
APP-211ENST00000462267 ZC3H7BQ9UGR2 993 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms