RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 FPR1P21462 350 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 DNAJA1P31689 397 aaKnown RBP17.96■□□□□ 0.47
HPS3-204ENST00000462030 CLK1P49759 484 aaKnown RBP17.96■□□□□ 0.47
HPS3-204ENST00000462030 NKX2-5P52952 324 aaPredicted RBP17.96■□□□□ 0.47
HPS3-204ENST00000462030 TWF1Q12792 350 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 PLEKHG6Q3KR16 790 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 CTXN3Q4LDR2 81 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 KIAA1614Q5VZ46 1190 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 ZNF598Q86UK7 904 aaKnown RBP17.96■□□□□ 0.47
HPS3-204ENST00000462030 SERPINA9Q86WD7 417 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 LACC1Q8IV20 430 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 KIAA1958Q8N8K9 716 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 FAM83FQ8NEG4 500 aaPredicted RBP17.96■□□□□ 0.47
HPS3-204ENST00000462030 MIR1-1HGQ9H1L0 117 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 KIF17Q9P2E2 1029 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.96■□□□□ 0.47
HPS3-204ENST00000462030 PIKFYVEQ9Y2I7 2098 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 SLC25A14O95258 325 aaPredicted RBP17.96■□□□□ 0.47
HPS3-204ENST00000462030 PDYNP01213 254 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 RHOCP08134 193 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 ALPIP09923 528 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 EBLN1P0CF75 366 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 MAGP20916 626 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 MAGEA11P43364 429 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 HNRNPFP52597 415 aaKnown RBP17.96■□□□□ 0.47
HPS3-204ENST00000462030 CDH4P55283 916 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 CLDN8P56748 225 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 ZNF404Q494X3 552 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 TSPYL5Q86VY4 417 aaPredicted RBP17.96■□□□□ 0.47
HPS3-204ENST00000462030 HORMAD1Q86X24 394 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 POC5Q8NA72 575 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 ATG16L2Q8NAA4 619 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 DNASE1L2Q92874 299 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 CEP295NLQ96MC4 621 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 NTMT1Q9BV86 223 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 SAMHD1Q9Y3Z3 626 aaKnown RBP17.96■□□□□ 0.47
HPS3-204ENST00000462030 METTL15A6NJ78 407 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 FABP3P05413 133 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 ZNF24P17028 368 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 EFNA1P20827 205 aaPredicted RBP17.95■□□□□ 0.46
HPS3-204ENST00000462030 RGS4P49798 205 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 MTA1Q13330 715 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 ZCCHC8Q6NZY4 707 aaKnown RBP17.95■□□□□ 0.46
HPS3-204ENST00000462030 RNF165Q6ZSG1 346 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 RASAL3Q86YV0 1011 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 Q8N9G6 341 aaPredicted RBP17.95■□□□□ 0.46
HPS3-204ENST00000462030 SLC38A4Q969I6 547 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 EGLN2Q96KS0 407 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 ITPAQ9BY32 194 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 GPR63Q9BZJ6 419 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 C6orf62Q9GZU0 229 aaPredicted RBP17.95■□□□□ 0.46
HPS3-204ENST00000462030 AASDHPPTQ9NRN7 309 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 PCDHB9Q9Y5E1 797 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 MICAL3Q7RTP6 2002 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 DLGAP3O95886 979 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 EPB42P16452 691 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 RPP38P78345 283 aaKnown RBP17.95■□□□□ 0.46
HPS3-204ENST00000462030 ARF5P84085 180 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 UBE2UQ5VVX9 321 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 Q6ZPB1 254 aaPredicted RBP17.95■□□□□ 0.46
HPS3-204ENST00000462030 CYP2U1Q7Z449 544 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 AKAP14Q86UN6 197 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 ENTHD1Q8IYW4 607 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 DNAJB8Q8NHS0 232 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 TXNDC15Q96J42 360 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 EHD1Q9H4M9 534 aa17.95■□□□□ 0.46
HPS3-204ENST00000462030 PABPN1LA6NDY0 278 aaKnown RBP17.94■□□□□ 0.46
HPS3-204ENST00000462030 M0R082 166 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 RFXANKO14593 260 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 AIREO43918 545 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 PGLSO95336 258 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 PRAMEF1O95521 474 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 CD160O95971 181 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 SEMG1P04279 462 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 HOXB6P17509 224 aaKnown RBP17.94■□□□□ 0.46
HPS3-204ENST00000462030 GTF2E2P29084 291 aaKnown RBP17.94■□□□□ 0.46
HPS3-204ENST00000462030 PPP3CCP48454 512 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 NEK2P51955 445 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 PROX2Q3B8N5 592 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 OR4F3Q6IEY1 312 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 C16orf59Q7L2K0 433 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 DENND1CQ8IV53 801 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 ISPDA4D126 451 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 AGAP5A6NIR3 686 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 PSMD11O00231 422 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 GAPDHSO14556 408 aaPredicted RBP17.94■□□□□ 0.46
HPS3-204ENST00000462030 SNPHO15079 494 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 DBTP11182 482 aaKnown RBP17.94■□□□□ 0.46
HPS3-204ENST00000462030 ZNF7P17097 686 aaPredicted RBP17.94■□□□□ 0.46
HPS3-204ENST00000462030 GADD45AP24522 165 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 C21orf33P30042 268 aaPredicted RBP17.94■□□□□ 0.46
HPS3-204ENST00000462030 ARHGEF7Q14155 803 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 LRIT3Q3SXY7 679 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 MMP27Q9H306 513 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 EPS8L2Q9H6S3 715 aa17.94■□□□□ 0.46
HPS3-204ENST00000462030 GOLGA8CPA6NN73 597 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 RFPL2O75678 378 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 SDC1P18827 310 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 EPORP19235 508 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 DGKAP23743 735 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms