RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 AGXT2Q9BYV1 514 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 PAIP1Q9H074 479 aaKnown RBP3.86□□□□□ -1.79
UBA3-204ENST00000461522 RAB6CQ9H0N0 254 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 SCPEP1Q9HB40 452 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 C2orf42Q9NWW7 574 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 PDP2Q9P2J9 529 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 UBA2Q9UBT2 640 aaPredicted RBP3.86□□□□□ -1.79
UBA3-204ENST00000461522 ZMAT5Q9UDW3 170 aaKnown RBP3.86□□□□□ -1.79
UBA3-204ENST00000461522 STK39Q9UEW8 545 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 CFAP45Q9UL16 551 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 CRYL1Q9Y2S2 319 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 C2CD2Q9Y426 696 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 CLIC4Q9Y696 253 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 MAU2Q9Y6X3 613 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 COL4A5P29400 1685 aa3.86□□□□□ -1.79
UBA3-204ENST00000461522 A0A0G2JNG1 304 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 C1orf226A1L170 272 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 PLOD2O00469 737 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 TGFB1I1O43294 461 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 BUD23O43709 281 aaKnown RBP3.85□□□□□ -1.79
UBA3-204ENST00000461522 DKC1O60832 514 aaKnown RBP eCLIP3.85□□□□□ -1.79
UBA3-204ENST00000461522 SEC14L2O76054 403 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 CAVIN2O95810 425 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 TSHBP01222 138 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 IGLV1-44P01699 117 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 SLC4A1P02730 911 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 CD48P09326 243 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 RPS2P15880 293 aaKnown RBP3.85□□□□□ -1.79
UBA3-204ENST00000461522 ICAM3P32942 547 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 NF2P35240 595 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 NOVP48745 357 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 HARS2P49590 506 aaKnown RBP3.85□□□□□ -1.79
UBA3-204ENST00000461522 LIMK1P53667 647 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 F2RL1P55085 397 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 EVCP57679 992 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 MBTD1Q05BQ5 628 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 LRRC74AQ0VAA2 488 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 KRT32Q14532 448 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 KIR2DS5Q14953 304 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 NECTIN1Q15223 517 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 C12orf60Q5U649 245 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 MTERF4Q7Z6M4 381 aaKnown RBP3.85□□□□□ -1.79
UBA3-204ENST00000461522 ADGRA1Q86SQ6 560 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 ESX1Q8N693 406 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 WDR20Q8TBZ3 569 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 UTP15Q8TED0 518 aaKnown RBP3.85□□□□□ -1.79
UBA3-204ENST00000461522 SENP5Q96HI0 755 aaPredicted RBP3.85□□□□□ -1.79
UBA3-204ENST00000461522 CNDP2Q96KP4 475 aaKnown RBP3.85□□□□□ -1.79
UBA3-204ENST00000461522 ZNF599Q96NL3 588 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 NEK1Q96PY6 1258 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 PIP5K1AQ99755 562 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 ADPGKQ9BRR6 497 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 MXD3Q9BW11 206 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 RNF41Q9H4P4 317 aaPredicted RBP3.85□□□□□ -1.79
UBA3-204ENST00000461522 TDRD3Q9H7E2 651 aaKnown RBP3.85□□□□□ -1.79
UBA3-204ENST00000461522 ZWILCHQ9H900 591 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 ZBTB20Q9HC78 741 aaPredicted RBP3.85□□□□□ -1.79
UBA3-204ENST00000461522 ADPRHL2Q9NX46 363 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 AATFQ9NY61 560 aaKnown RBP eCLIP3.85□□□□□ -1.79
UBA3-204ENST00000461522 DLGAP2Q9P1A6 1054 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 COPG2Q9UBF2 871 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 MTRRQ9UBK8 725 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 CNOT8Q9UFF9 292 aaKnown RBP3.85□□□□□ -1.79
UBA3-204ENST00000461522 SPEF2Q9C093 1822 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 CCDC171Q6TFL3 1326 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 PASKQ96RG2 1323 aa3.85□□□□□ -1.79
UBA3-204ENST00000461522 WDR90Q96KV7 1748 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 IGKV3D-20A0A0C4DH25 116 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 A0A0D9SFI3 127 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 CASQ2O14958 399 aaPredicted RBP3.84□□□□□ -1.79
UBA3-204ENST00000461522 MTRF1O75570 445 aaKnown RBP3.84□□□□□ -1.79
UBA3-204ENST00000461522 SFTPCP11686 197 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 NR2F2P24468 414 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 KRT9P35527 623 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 TNNT3P45378 269 aaPredicted RBP3.84□□□□□ -1.79
UBA3-204ENST00000461522 SPOCK1Q08629 439 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 BECN1Q14457 450 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 PNLIPRP3Q17RR3 467 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 FILIP1LQ4L180 1135 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 SOWAHCQ53LP3 525 aaPredicted RBP3.84□□□□□ -1.79
UBA3-204ENST00000461522 ZNF805Q5CZA5 627 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 NSUN5P2Q63ZY6 315 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 CWC27Q6UX04 472 aaKnown RBP3.84□□□□□ -1.79
UBA3-204ENST00000461522 LONP2Q86WA8 852 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 VSIG1Q86XK7 387 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 GALNT13Q8IUC8 556 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 PM20D2Q8IYS1 436 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 RNF168Q8IYW5 571 aaPredicted RBP3.84□□□□□ -1.79
UBA3-204ENST00000461522 SLC38A9Q8NBW4 561 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 RDM1Q8NG50 284 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 ANKRD49Q8WVL7 239 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 ZNF75CPQ92670 426 aaPredicted RBP3.84□□□□□ -1.79
UBA3-204ENST00000461522 RBM18Q96H35 190 aaKnown RBP3.84□□□□□ -1.79
UBA3-204ENST00000461522 RADILQ96JH8 1075 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 SPATA17Q96L03 361 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 TSGA13Q96PP4 275 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 MAP7D2Q96T17 732 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 BAG1Q99933 345 aaPredicted RBP3.84□□□□□ -1.79
UBA3-204ENST00000461522 NCAPGQ9BPX3 1015 aa3.84□□□□□ -1.79
UBA3-204ENST00000461522 TCHPQ9BT92 498 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms