RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 CRYL1Q9Y2S2 319 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 CROCCQ5TZA2 2017 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 OTOGQ6ZRI0 2925 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 IGHV5-51A0A0C4DH38 117 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 BTN3A3O00478 584 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 KPNA5O15131 536 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 EIF3HO15372 352 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 HAUS5O94927 633 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 MSL3P1P0C860 447 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 ERVK-10P10266 1014 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 ERGP11308 486 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 PRF1P14222 555 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 FMO4P31512 558 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 TUBB4BP68371 445 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 MPP1Q00013 466 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 CKAP4Q07065 602 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 HSPA14Q0VDF9 509 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 GPS2Q13227 327 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 TUBB2AQ13885 445 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 NAA30Q147X3 362 aaPredicted RBP13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 KYNUQ16719 465 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 PTRHD1Q6GMV3 140 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 IRGCQ6NXR0 463 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 CNSTQ6PJW8 725 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 UNC5DQ6UXZ4 953 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 FAM92BQ6ZTR7 304 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 CYS1Q717R9 158 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 MMGT1Q8N4V1 131 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 ST6GALNAC3Q8NDV1 305 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 PHC3Q8NDX5 983 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 FAM167BQ9BTA0 163 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 TUBB2BQ9BVA1 445 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 TSSK1BQ9BXA7 367 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 NLNQ9BYT8 704 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 FBXO6Q9NRD1 293 aaPredicted RBP13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 ZDHHC18Q9NUE0 388 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 HRASLS2Q9NWW9 162 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 ZC3H7BQ9UGR2 993 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 TCFL5Q9UL49 500 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 SNX7Q9UNH6 387 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 BTRCQ9Y297 605 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 COMMD10Q9Y6G5 202 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 SPTBP11277 2137 aa13.16□□□□□ -0.3
SCAMP4-206ENST00000460767 SEC16AO15027 2179 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 PCSK5Q92824 1860 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 UBA6A0AVT1 1052 aaPredicted RBP13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 TLCD2A6NGC4 264 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 MATN2O00339 956 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 BTN3A1O00481 513 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 PFDN6O15212 129 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 PRICKLE3O43900 615 aaPredicted RBP13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 KLHL41O60662 606 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 SCRG1O75711 98 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 AHSGP02765 367 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 APOA4P06727 396 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 KLK3P07288 261 aaPredicted RBP13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 ITGA3P26006 1051 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 PEBP1P30086 187 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 KPNA2P52292 529 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 PER3P56645 1201 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 GUCY2DQ02846 1103 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 THOC5Q13769 683 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 ELOAQ14241 798 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 BRD3Q15059 726 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 ZNF449Q6P9G9 518 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 NEK10Q6ZWH5 1172 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 OTOAQ7RTW8 1153 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 OOSP2Q86WS3 158 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 LINC01555Q8NAE3 123 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 NOA1Q8NC60 698 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 HMGCLL1Q8TB92 370 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 FBXO25Q8TCJ0 367 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 CD200R1Q8TD46 325 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 ZNF501Q96CX3 271 aaPredicted RBP13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 PPM1MQ96MI6 270 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 FERD3LQ96RJ6 166 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 MAP3K3Q99759 626 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 AARSD1Q9BTE6 412 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 MFRPQ9BY79 579 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 CHRNA10Q9GZZ6 450 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 OR6C2Q9NZP2 312 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 MAP10Q9P2G4 905 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 POLG2Q9UHN1 485 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 CHMP2BQ9UQN3 213 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 ASF1AQ9Y294 204 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 DHRS7Q9Y394 339 aa13.15□□□□□ -0.3
SCAMP4-206ENST00000460767 PCM1Q15154 2024 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 OR6C74A6NCV1 312 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 EIF3FO00303 357 aaPredicted RBP13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 PSIP1O75475 530 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 URI1O94763 535 aaPredicted RBP13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 C1orf105O95561 183 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 EBLN1P0CF75 366 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 PKLRP30613 574 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 RORAP35398 523 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 HSD11B2P80365 405 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 PDIA2Q13087 525 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 PLCL1Q15111 1095 aa13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 ZRSR2Q15696 482 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-206ENST00000460767 PLEKHN1Q494U1 663 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms