RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 LHX1P48742 406 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 LIMK1P53667 647 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 CSE1LP55060 971 aaKnown RBP2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 GCNT1Q02742 428 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 CALD1Q05682 793 aaKnown RBP2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 PRPF4BQ13523 1007 aaKnown RBP2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 VEZF1Q14119 521 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 TNIP1Q15025 636 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 HLA-BQ31612 363 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 ARMC4Q5T2S8 1044 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 ERMARDQ5T6L9 678 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 MFSD4BQ5TF39 518 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 BSPRYQ5W0U4 402 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 ZNF613Q6PF04 617 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 SLC25A47Q6Q0C1 308 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 TMEM207Q6UWW9 146 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 METTL7BQ6UX53 244 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 ZBTB49Q6ZSB9 765 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 DET1Q7L5Y6 550 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 PTAR1Q7Z6K3 402 aaPredicted RBP2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 CENPVQ7Z7K6 275 aaPredicted RBP2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 IQCHQ86VS3 1027 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 ZNF440Q8IYI8 595 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 MAML2Q8IZL2 1156 aaPredicted RBP2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 LGI2Q8N0V4 545 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 NDUFAF2Q8N183 169 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 BMPERQ8N8U9 685 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 GPRC5AQ8NFJ5 357 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 OR4K1Q8NGD4 311 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 OR1L3Q8NH93 324 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 PIGBQ92521 554 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 SECISBP2LQ93073 1101 aaKnown RBP2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 ZNF689Q96CS4 500 aaPredicted RBP2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 C10orf90Q96M02 699 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 SLF1Q9BQI6 1058 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 FGFBP2Q9BYJ0 223 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 TLE6Q9H808 572 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 ERAP1Q9NZ08 941 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 EPHA6Q9UF33 1036 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 ASIC3Q9UHC3 531 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 RNF150Q9ULK6 438 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 WDR83OSQ9Y284 106 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 TMED3Q9Y3Q3 217 aa2.6□□□□□ -1.99
SCARNA18-201ENST00000459004 C15orf61A6NNL5 157 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 HMGB1P1B2RPK0 211 aaPredicted RBP2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 O00370 1275 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 SPRY1O43609 319 aaPredicted RBP2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 PSMD10O75832 226 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 MOCS3O95396 460 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 SEC24AO95486 1093 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 SLC2A2P11168 524 aaPredicted RBP2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 GP1BBP13224 206 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 DARSP14868 501 aaKnown RBP2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 LEPRP48357 1165 aaKnown RBP2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 TAF6P49848 677 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 PAX9P55771 341 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 HUNKP57058 714 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 KRTAP10-12P60413 245 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 POLR2LP62875 67 aaKnown RBP2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 AIMP1Q12904 312 aaKnown RBP2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 RALGDSQ12967 914 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 DRP2Q13474 957 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 CUL3Q13618 768 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 LYSMD4Q5XG99 296 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 UGT3A1Q6NUS8 523 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 C16orf54Q6UWD8 224 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 PLPPR4Q7Z2D5 763 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 GTSCR1Q86UQ5 136 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 MMD2Q8IY49 270 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 SLCO2A1Q92959 643 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 FAM71F1Q96KD3 344 aaPredicted RBP2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 LINC00615Q96LM1 132 aaPredicted RBP2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 AGAP3Q96P47 875 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 LRRC3BQ96PB8 259 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 USP28Q96RU2 1077 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 IWS1Q96ST2 819 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 CPNE1Q99829 537 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 ZMYND12Q9H0C1 365 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 THAP2Q9H0W7 228 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 CDH20Q9HBT6 801 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 CHST11Q9NPF2 352 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 MAN2C1Q9NTJ4 1040 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 ANKEF1Q9NU02 776 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 NKIRAS2Q9NYR9 191 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 C19orf25Q9UFG5 118 aaPredicted RBP2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 TTLL3Q9Y4R7 772 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 MMP24Q9Y5R2 645 aa2.59□□□□□ -1.99
SCARNA18-201ENST00000459004 KPNA7A9QM74 516 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 E9PQ18 207 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 CLDN4O14493 209 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 ZNF195O14628 629 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 TADA2AO75478 443 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 ATP5BP06576 529 aaKnown RBP2.58□□□□□ -2
SCARNA18-201ENST00000459004 CSN3P07498 182 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 LDHCP07864 332 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 TRIM49P0CI25 452 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 TRIM49CP0CI26 452 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 MYBL1P10243 752 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 CD22P20273 847 aa2.58□□□□□ -2
SCARNA18-201ENST00000459004 CYP2A7P20853 494 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms