RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 CCNFP41002 786 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 FOXL2P58012 376 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 CDK16Q00536 496 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 GPS1Q13098 491 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 GRB7Q14451 532 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 CTSL3PQ5NE16 218 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 FIGLAQ6QHK4 219 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 HPS6Q86YV9 775 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 MAGEC3Q8TD91 643 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 C5orf34Q96MH7 638 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 MENTQ9BUN1 341 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 SOX13Q9UN79 622 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 FAM169AQ9Y6X4 670 aa15.11■□□□□ 0.01
CHCHD3-204ENST00000457942 ANKRD12Q6UB98 2062 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 NUP210LQ5VU65 1888 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 PCSK5Q92824 1860 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 TCRBV7S3A2A0A539 114 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 ARHGAP10A1A4S6 786 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 KRT87PA6NCN2 255 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 H3BMM5 538 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 NIPSNAP2O75323 286 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 C1orf105O95561 183 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 ALPPP05187 535 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 PIM1P11309 404 aaPredicted RBP15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 CHRM3P20309 590 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 MCM3P25205 808 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 PSMB5P28074 263 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 TSTA3Q13630 321 aaPredicted RBP15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 GRM7Q14831 915 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 CCSMST1Q4G0I0 132 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 TCTE1Q5JU00 501 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 DCAF10Q5QP82 559 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 VWA5B1Q5TIE3 1220 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 FCRL6Q6DN72 434 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 ZNF662Q6ZS27 426 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 METTL27Q8N6F8 245 aaPredicted RBP15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 PTERQ96BW5 349 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 MIPEPQ99797 713 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 KIFC1Q9BW19 673 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 CUTCQ9NTM9 273 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 P4HTMQ9NXG6 502 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 CDC23Q9UJX2 597 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 CRYL1Q9Y2S2 319 aa15.1■□□□□ 0.01
CHCHD3-204ENST00000457942 WIPF3A6NGB9 483 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 DSCR3O14972 297 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 KLHL41O60662 606 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 CNOT3O75175 753 aaKnown RBP15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 FKBP9O95302 570 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 KRT14P02533 472 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 ERVK-10P10266 1014 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 ELAVL4P26378 380 aaKnown RBP15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 ARNTP27540 789 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 VSX2P58304 361 aaPredicted RBP15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 KIAA0930Q6ICG6 404 aaPredicted RBP15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 GALNT16Q8N428 558 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 RBMXL3Q8N7X1 1067 aaKnown RBP15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 PRELID2Q8N945 189 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 LPGAT1Q92604 370 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 PNPLA2Q96AD5 504 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 ZNF669Q96BR6 464 aaPredicted RBP15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 ASF1BQ9NVP2 202 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 SPATA7Q9P0W8 599 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 SLC5A6Q9Y289 635 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 PPP2R2CQ9Y2T4 447 aa15.09■□□□□ 0.01
CHCHD3-204ENST00000457942 A0A0J9YVX5 310 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 CTAGE9A4FU28 777 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 AVILO75366 819 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 ESR1P03372 595 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 EIF2S1P05198 315 aaKnown RBP15.08■□□□□ 0
CHCHD3-204ENST00000457942 PRF1P14222 555 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 OGNP20774 298 aaKnown RBP15.08■□□□□ 0
CHCHD3-204ENST00000457942 ITGA3P26006 1051 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 THOC5Q13769 683 aaKnown RBP15.08■□□□□ 0
CHCHD3-204ENST00000457942 KCNJ11Q14654 390 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 TYSND1Q2T9J0 566 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 IRAK1BP1Q5VVH5 260 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 YOD1Q5VVQ6 348 aaPredicted RBP15.08■□□□□ 0
CHCHD3-204ENST00000457942 MRPL14Q6P1L8 145 aaKnown RBP15.08■□□□□ 0
CHCHD3-204ENST00000457942 SHISA6Q6ZSJ9 500 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 PPP1R32Q7Z5V6 425 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 CISD2Q8N5K1 135 aaKnown RBP15.08■□□□□ 0
CHCHD3-204ENST00000457942 TM9SF4Q92544 642 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 ZUFSPQ96AP4 578 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 FKBP10Q96AY3 582 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 SNRNP40Q96DI7 357 aaKnown RBP15.08■□□□□ 0
CHCHD3-204ENST00000457942 BIRC8Q96P09 236 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 TCF12Q99081 682 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 SMAD5Q99717 465 aaKnown RBP15.08■□□□□ 0
CHCHD3-204ENST00000457942 ACAT2Q9BWD1 397 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 CCDC68Q9H2F9 335 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 SOX17Q9H6I2 414 aaPredicted RBP15.08■□□□□ 0
CHCHD3-204ENST00000457942 IL1RAPL1Q9NZN1 696 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 VPS9D1Q9Y2B5 631 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 CROCCQ5TZA2 2017 aa15.08■□□□□ 0
CHCHD3-204ENST00000457942 PCM1Q15154 2024 aa15.07■□□□□ 0
CHCHD3-204ENST00000457942 CELSR1Q9NYQ6 3014 aa15.07■□□□□ 0
CHCHD3-204ENST00000457942 TARM1B6A8C7 271 aa15.07■□□□□ 0
CHCHD3-204ENST00000457942 GOLGA8MH3BSY2 632 aa15.07■□□□□ 0
CHCHD3-204ENST00000457942 MASP2O00187 686 aa15.07■□□□□ 0
CHCHD3-204ENST00000457942 UMODP07911 640 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms