RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 SMYD1Q8NB12 490 aa17.87■□□□□ 0.45
SEMA3B-209ENST00000456560 FCRL1Q96LA6 429 aa17.87■□□□□ 0.45
SEMA3B-209ENST00000456560 MUS81Q96NY9 551 aa17.87■□□□□ 0.45
SEMA3B-209ENST00000456560 TSSK3Q96PN8 268 aa17.87■□□□□ 0.45
SEMA3B-209ENST00000456560 LINC00597Q9H2U6 94 aa17.87■□□□□ 0.45
SEMA3B-209ENST00000456560 RMND5AQ9H871 391 aa17.87■□□□□ 0.45
SEMA3B-209ENST00000456560 HPS4Q9NQG7 708 aa17.87■□□□□ 0.45
SEMA3B-209ENST00000456560 TBCCD1Q9NVR7 557 aa17.87■□□□□ 0.45
SEMA3B-209ENST00000456560 UTS2RQ9UKP6 389 aa17.87■□□□□ 0.45
SEMA3B-209ENST00000456560 CDC14AQ9UNH5 594 aa17.87■□□□□ 0.45
SEMA3B-209ENST00000456560 PTPRSQ13332 1948 aa17.87■□□□□ 0.45
SEMA3B-209ENST00000456560 ZNF701M0R085 212 aaPredicted RBP17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 AMD1P17707 334 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 ITPKAP23677 461 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 EPHA5P54756 1037 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 PFN3P60673 137 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 TEAD2Q15562 447 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 FRG2Q64ET8 278 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 TMEM215Q68D42 235 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 Q6ZNX1 250 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 KIAA0907Q7Z7F0 614 aaPredicted RBP17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 MYLIPQ8WY64 445 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 FBXL8Q96CD0 374 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 RDH12Q96NR8 316 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 FRG2BQ96QU4 278 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 HEPHQ9BQS7 1158 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 ERVW-1Q9UQF0 538 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 TSPAN11A1L157 253 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 KRT87PA6NCN2 255 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 C16orf96A6NNT2 1141 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 G3V2T6 193 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 SLCO2B1O94956 709 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 TIMP1P01033 207 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 CST1P01037 141 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 ACRP10323 421 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 TYRP14679 529 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 JUPP14923 745 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 IL1RNP18510 177 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 HLCSP50747 726 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 ZDHHC13Q8IUH4 622 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 TMEM132CQ8N3T6 1108 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 FRS2Q8WU20 508 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 ELMO1Q92556 727 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 FAM120BQ96EK7 910 aaKnown RBP17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 AURKBQ96GD4 344 aaPredicted RBP17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 MAGEB10Q96LZ2 347 aaPredicted RBP17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 MAGIXQ9H6Y5 334 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 SPHK2Q9NRA0 654 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 USE1Q9NZ43 259 aa17.86■□□□□ 0.45
SEMA3B-209ENST00000456560 PLXNA2O75051 1894 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 PABPN1LA6NDY0 278 aaKnown RBP17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 CFAP99D6REC4 459 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 WNT9AO14904 365 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 B3GALT4O96024 378 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 TIMP2P16035 220 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 DDX6P26196 483 aaKnown RBP eCLIP17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 SHMT2P34897 504 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 CDKN2CP42773 168 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 IST1P53990 364 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 CHIT1Q13231 466 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 CBX2Q14781 532 aaPredicted RBP17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 ELMSAN1Q6PJG2 1045 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 MSANTD1Q6ZTZ1 278 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 Q6ZVL8 140 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 CLEC4FQ8N1N0 589 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 PJA1Q8NG27 643 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 NETO1Q8TDF5 533 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 EGLN2Q96KS0 407 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 MRGPRX3Q96LB0 322 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 FAM83CQ9BQN1 747 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 OSBPL10Q9BXB5 764 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 ATG10Q9H0Y0 220 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 CXorf21Q9HAI6 301 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 GPRC5BQ9NZH0 403 aa17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 IFT80Q9P2H3 777 aaPredicted RBP17.85■□□□□ 0.45
SEMA3B-209ENST00000456560 FOXD2O60548 495 aaPredicted RBP17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 GSNP06396 782 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 TPP2P29144 1249 aaPredicted RBP17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 MTAPQ13126 283 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 PMS2P3Q13401 168 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 PGS1Q32NB8 556 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 CYP2U1Q7Z449 544 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 ANKRD46Q86W74 232 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 SVOPLQ8N434 492 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 TRAM1L1Q8N609 369 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 DDHD1Q8NEL9 900 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 ASZ1Q8WWH4 475 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 THAP11Q96EK4 314 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 APOLD1Q96LR9 279 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 PCDH12Q9NPG4 1184 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 TDP1Q9NUW8 608 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 NFKBIL1Q9UBC1 381 aaPredicted RBP17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 ATE1O95260 518 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 ETV3P41162 512 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 RECQLP46063 649 aaPredicted RBP17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 PPP2R2BQ00005 443 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 ABHD18Q0P651 414 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 KCNC3Q14003 757 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 HENMT1Q5T8I9 393 aaKnown RBP17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 NOXRED1Q6NXP6 359 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms