RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 MSANTD2Q6P1R3 559 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 HORMAD1Q86X24 394 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 CIR1Q86X95 450 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 PEX5LQ8IYB4 626 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 ELMOD2Q8IZ81 293 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 NKAPQ8N5F7 415 aaKnown RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 CD200R1Q8TD46 325 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 FCGR1BQ92637 280 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 TADA1Q96BN2 335 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 CEP19Q96LK0 163 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 CPPED1Q9BRF8 314 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 SLC30A2Q9BRI3 323 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 CLMPQ9H6B4 373 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 IPPKQ9H8X2 491 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 QTRT2Q9H974 415 aaKnown RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 SERHLQ9NQF3 203 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 NUFIP1Q9UHK0 495 aaKnown RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 PTCH2Q9Y6C5 1203 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 LTBP4Q8N2S1 1624 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 PNMA8CA0A1B0GUJ8 204 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 M0R129 80 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 RGS5O15539 181 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 TLR5O60602 858 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 MRPS14O60783 128 aaKnown RBP10.04□□□□□ -0.8
CLIP4-208ENST00000456385 IL6P05231 212 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 ADORA3P0DMS8 318 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 FPR1P21462 350 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 TNFSF8P32971 234 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 ETV6P41212 452 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 HTR2BP41595 481 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 PIK3CBP42338 1070 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 LHX1P48742 406 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 DOC2BQ14184 412 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 TAB1Q15750 504 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 SMU1Q2TAY7 513 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 PARP15Q460N3 678 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 PSAPL1Q6NUJ1 521 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 TRAF7Q6Q0C0 670 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 NOXA1Q86UR1 476 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 RAB43Q86YS6 212 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 DNAJB3Q8WWF6 145 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 MTFMTQ96DP5 389 aaKnown RBP10.04□□□□□ -0.8
CLIP4-208ENST00000456385 NECTIN4Q96NY8 510 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 RTP3Q9BQQ7 232 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 ROGDIQ9GZN7 287 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 ABCG8Q9H221 673 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 NMUR1Q9HB89 426 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 RAD18Q9NS91 495 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 THUMPD1Q9NXG2 353 aaKnown RBP10.04□□□□□ -0.8
CLIP4-208ENST00000456385 TRMT6Q9UJA5 497 aaKnown RBP10.04□□□□□ -0.8
CLIP4-208ENST00000456385 TTC3P53804 2025 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 GFRA2O00451 464 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 FKBP9O95302 570 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 CDK1P06493 297 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 IL1RNP18510 177 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 IFNA8P32881 189 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 HSPA7P48741 367 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 CD83Q01151 205 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 PTPRRQ15256 657 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 CTSL3PQ5NE16 218 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 ARMC4Q5T2S8 1044 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 DOK6Q6PKX4 331 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 UMODL1-AS1Q8N2C9 162 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 DNAJC22Q8N4W6 341 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 PIK3R3Q92569 461 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 PPP3R2Q96LZ3 170 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 PITX2Q99697 317 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 NSUN3Q9H649 340 aaKnown RBP10.04□□□□□ -0.8
CLIP4-208ENST00000456385 SLA2Q9H6Q3 261 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 MIOSQ9NXC5 875 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 COMMD10Q9Y6G5 202 aa10.04□□□□□ -0.8
CLIP4-208ENST00000456385 TNS1Q9HBL0 1735 aaKnown RBP10.03□□□□□ -0.8
CLIP4-208ENST00000456385 CLCA1A8K7I4 914 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 CPNE3O75131 537 aaKnown RBP10.03□□□□□ -0.8
CLIP4-208ENST00000456385 VPS26AO75436 327 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 SLC25A27O95847 323 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 FGF1P05230 155 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 FABP3P05413 133 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 ADRA2AP08913 450 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 PKMP14618 531 aaKnown RBP10.03□□□□□ -0.8
CLIP4-208ENST00000456385 SOX6P35712 828 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 ACVRL1P37023 503 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 TGM4P49221 684 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 TUFMP49411 452 aaKnown RBP10.03□□□□□ -0.8
CLIP4-208ENST00000456385 FAM189BP81408 668 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 SCD5Q86SK9 330 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 LRRTM3Q86VH5 581 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 UBE2J2Q8N2K1 259 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 TEX26Q8N6G2 289 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 HRASLS5Q96KN8 279 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 CEP295NLQ96MC4 621 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 OR5M11Q96RB7 305 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 MCCC1Q96RQ3 725 aaPredicted RBP10.03□□□□□ -0.8
CLIP4-208ENST00000456385 CCDC32Q9BV29 185 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 ABCC13Q9NSE7 274 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 TMEM184CQ9NVA4 438 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 TOR4AQ9NXH8 423 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 SPASTQ9UBP0 616 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 ZNF490Q9ULM2 529 aaPredicted RBP10.03□□□□□ -0.8
CLIP4-208ENST00000456385 SAMD4AQ9UPU9 718 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms