RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 C2orf73Q8N5S3 287 aaPredicted RBP16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 PPP1R14CQ8TAE6 165 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 BAHD1Q8TBE0 780 aaPredicted RBP16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 ZNF75CPQ92670 426 aaPredicted RBP16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 RSC1A1Q92681 617 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 CCDC74AQ96AQ1 378 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 CNDP1Q96KN2 507 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 NSUN5Q96P11 429 aaKnown RBP16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 TRMOQ9BU70 441 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 PCBD2Q9H0N5 130 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 EPB41L1Q9H4G0 881 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 CCDC134Q9H6E4 229 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 MANSC1Q9H8J5 431 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 ACSS2Q9NR19 701 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 EVA1BQ9NVM1 165 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 SPHK1Q9NYA1 384 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 GPRC5BQ9NZH0 403 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 OGFRQ9NZT2 677 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 ENTPD2Q9Y5L3 495 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 PIPSLA2A3N6 862 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 OR6C74A6NCV1 312 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 TMEM114B3SHH9 223 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 GDF9O60383 454 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 CBFA2T3O75081 653 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 PROS1P07225 676 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 NEFHP12036 1026 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 EPB42P16452 691 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 CDH13P55290 713 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 GUCY1A3Q02108 690 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 PCDH1Q08174 1060 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 GALNT1Q10472 559 aaPredicted RBP16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 CDC16Q13042 620 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 RCN2Q14257 317 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 ATG16L1Q676U5 607 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 KLHL35Q6PF15 583 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 RPS27LQ71UM5 84 aaKnown RBP16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 TEX9Q8N6V9 391 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 OR2A1Q8NGT9 310 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 FLVCR1-AS1Q8TAF5 88 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 RHBDD1Q8TEB9 315 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 SLC22A18Q96BI1 424 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 CNDP2Q96KP4 475 aaKnown RBP16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 HAUS8Q9BT25 410 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 DRC3Q9H069 523 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 KCNK4Q9NYG8 393 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 PCDHB11Q9Y5F2 797 aa16.02■□□□□ 0.16
CCDC90B-202ENST00000455220 IGHV1OR21-1A0A087WYE8 117 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 MATN2O00339 956 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 SH3BP5O60239 455 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 SNNO75324 88 aaPredicted RBP16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 KATNA1O75449 491 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 LDOC1O95751 146 aaPredicted RBP16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 MLYCDO95822 493 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 CKMT2P17540 419 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 POLR2CP19387 275 aaPredicted RBP16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 PSMB5P28074 263 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 ARRB2P32121 409 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 GYS2P54840 703 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 GPLD1P80108 840 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 DAB2P98082 770 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 BST1Q10588 318 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 LCP2Q13094 533 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 STX3Q13277 289 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 TSTA3Q13630 321 aaPredicted RBP16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 PERM1Q5SV97 790 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 SPRED1Q7Z699 444 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 LSMEM2Q8N112 164 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 OR10G6Q8NH81 332 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 LRRC8CQ8TDW0 803 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 PPP4R1Q8TF05 950 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 RAB33BQ9H082 229 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 HRASLS2Q9NWW9 162 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 ACTR10Q9NZ32 417 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 TAC3Q9UHF0 121 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 KCNE2Q9Y6J6 123 aa16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 SNRNP200O75643 2136 aaKnown RBP16.01■□□□□ 0.15
CCDC90B-202ENST00000455220 CPED1A4D0V7 1026 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 C2orf74A8MZ97 194 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 OR7A17O14581 309 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 POLR3GO15318 223 aaPredicted RBP16■□□□□ 0.15
CCDC90B-202ENST00000455220 B4GAT1O43505 415 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 TYRP1P17643 537 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 AMD1P17707 334 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 ACP1P24666 158 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 ALDH4A1P30038 563 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 CCR10P46092 362 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 LIMK1P53667 647 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 OR1D5P58170 312 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 ABCE1P61221 599 aaKnown RBP16■□□□□ 0.15
CCDC90B-202ENST00000455220 PRDX1Q06830 199 aaKnown RBP16■□□□□ 0.15
CCDC90B-202ENST00000455220 PRKAA1Q13131 559 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 SQSTM1Q13501 440 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 E2F2Q14209 437 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 THEMIS2Q5TEJ8 643 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 STPG1Q5TH74 334 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 ATG14Q6ZNE5 492 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 EFL1Q7Z2Z2 1120 aaKnown RBP16■□□□□ 0.15
CCDC90B-202ENST00000455220 SNX31Q8N9S9 440 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 TRPC4APQ8TEL6 797 aa16■□□□□ 0.15
CCDC90B-202ENST00000455220 FAM122AQ96E09 287 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms