RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 Q6ZSR9 355 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 PRSS42Q7Z5A4 293 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 TLK2Q86UE8 772 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 NIM1KQ8IY84 436 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 RHEBL1Q8TAI7 183 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 STAG3L4Q8TBR4 150 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 AKAP1Q92667 903 aaKnown RBP eCLIP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 ESAMQ96AP7 390 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 ATG4CQ96DT6 458 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 HYLS1Q96M11 299 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 ACTL8Q9H568 366 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 SNTG1Q9NSN8 517 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 TLR6Q9Y2C9 796 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 OR51F1A6NGY5 319 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 CACNG3O60359 315 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 HOXB6P17509 224 aaKnown RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 RPS19P39019 145 aaKnown RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 FKBP1AP62942 108 aaKnown RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 ST3GAL4Q11206 333 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 MADCAM1Q13477 382 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 KYAT1Q16773 422 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 BRAT1Q6PJG6 821 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 EFHBQ8N7U6 833 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 OR10Z1Q8NGY1 313 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 NPLOC4Q8TAT6 608 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 CAMKK2Q96RR4 588 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 UQCC2Q9BRT2 126 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 TFB2MQ9H5Q4 396 aaKnown RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 MCUBQ9NWR8 336 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 C1orf109Q9NX04 203 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 MARCH4Q9P2E8 410 aaPredicted RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 PCDHGA6Q9Y5G7 932 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 I6L893 689 aaPredicted RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 VPS26AO75436 327 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 CSF3P09919 207 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 CCT3P49368 545 aaKnown RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 NDUFV1P49821 464 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 AGTR2P50052 363 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 KCNQ1P51787 676 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 VEPH1Q14D04 833 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 POU4F3Q15319 338 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 ANGPT1Q15389 498 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 GTDC1Q4AE62 458 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 INO80DQ53TQ3 878 aaPredicted RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 CLVS2Q5SYC1 327 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 HDDC2Q7Z4H3 204 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 COMMD7Q86VX2 200 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 GIMAP1Q8WWP7 306 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 NT5C3BQ969T7 300 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 CRELD1Q96HD1 420 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 MGLLQ99685 303 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 PITX2Q99697 317 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF225Q9UK10 706 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 OGDHLQ9ULD0 1010 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 COL2A1P02458 1487 aaPredicted RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 BRCA1P38398 1863 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 IGKV6D-21A0A0A0MT36 114 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 FABP12A6NFH5 140 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 PPEF2O14830 753 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 PER2O15055 1255 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC7A4O43246 635 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 KCNJ13O60928 360 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 AOC2O75106 756 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 STAU1O95793 577 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 MLYCDO95822 493 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 IQCF3P0C7M6 154 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 ADRA1AP35348 466 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 IDH2P48735 452 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 RORCP51449 518 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 DMC1Q14565 340 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM174BQ3ZCQ3 159 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 PYDC2Q56P42 97 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 SAXO2Q658L1 398 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 METTL2BQ6P1Q9 378 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 IL27RAQ6UWB1 636 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 RANBP10Q6VN20 620 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 HFE2Q6ZVN8 426 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF680Q8NEM1 530 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 KCNC2Q96PR1 638 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 GFM1Q96RP9 751 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 PPP1R16BQ96T49 567 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC9A7Q96T83 725 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 PPA2Q9H2U2 334 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 HEBP1Q9NRV9 189 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 PLCXD1Q9NUJ7 323 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 GABRQQ9UN88 632 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 CMAHPQ9Y471 501 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 CLCA3PQ9Y6N3 262 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF831Q5JPB2 1677 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 MYLKQ15746 1914 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 SCN1AP35498 2009 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 WASHC1A8K0Z3 465 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 H3BM21 787 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 RFPL3O75679 317 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TSPAN19P0C672 248 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 PER3P56645 1201 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 PSPHP78330 225 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 TEKQ02763 1124 aa9.17□□□□□ -0.94
SYNPO2-204ENST00000448416 MBTD1Q05BQ5 628 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms