RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 NUSAP1Q9BXS6 441 aaKnown RBP18.72■□□□□ 0.59
HMGA1-205ENST00000447654 MAGEB5Q9BZ81 275 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 RIBC2Q9H4K1 309 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 LIMD1Q9UGP4 676 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 U3KQ87 197 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 ZNF236Q9UL36 1845 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 A0A0B4J293 547 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 LOC100506127A0A0U1RQW1 187 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 SMIM28A0A1B0GU29 152 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 HAS3O00219 553 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 BTN3A3O00478 584 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 HMGN1P05114 100 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 PAMP19021 973 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 PRKG2Q13237 762 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 CLLU1Q5K131 121 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 PRSS36Q5K4E3 855 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 C9orf62Q8N4C0 152 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 CDYL2Q8N8U2 506 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 OR2T12Q8NG77 320 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 ELMO1Q92556 727 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 DACT3Q96B18 629 aaPredicted RBP18.71■□□□□ 0.59
HMGA1-205ENST00000447654 PTERQ96BW5 349 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 RNF31Q96EP0 1072 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 ZNF583Q96ND8 569 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 BEX2Q9BXY8 128 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 PTTG3PQ9NZH4 202 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 MUTYHQ9UIF7 546 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 MAPRE3Q9UPY8 281 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 B3GALNT1O75752 331 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 RECQL5O94762 991 aaPredicted RBP18.71■□□□□ 0.59
HMGA1-205ENST00000447654 PRKACGP22612 351 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 SOX11P35716 441 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 RGS6P49758 472 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 PSEN2P49810 448 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 PLK1P53350 603 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 PWP1Q13610 501 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 BAK1Q16611 211 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 KIAA1614Q5VZ46 1190 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 RASAL3Q86YV0 1011 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 DENND6AQ8IWF6 608 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 CYP4Z2PQ8N1L4 340 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 ZNF557Q8N988 423 aaPredicted RBP18.71■□□□□ 0.59
HMGA1-205ENST00000447654 TTC29Q8NA56 475 aaPredicted RBP18.71■□□□□ 0.59
HMGA1-205ENST00000447654 OR6B3Q8NGW1 331 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 FBXO30Q8TB52 745 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 KIAA1143Q96AT1 154 aaPredicted RBP18.71■□□□□ 0.59
HMGA1-205ENST00000447654 OR51B5Q9H339 312 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 SLAMF8Q9P0V8 285 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 PSORS1C1Q9UIG5 152 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 GMEB2Q9UKD1 530 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 FZD10Q9ULW2 581 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 DERAQ9Y315 318 aa18.71■□□□□ 0.59
HMGA1-205ENST00000447654 MYADML2A6NDP7 307 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 E9PQ18 207 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 SGTAO43765 313 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 ZNF254O75437 659 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 WBP4O75554 376 aaKnown RBP18.7■□□□□ 0.58
HMGA1-205ENST00000447654 ZNF250P15622 560 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 F8A1P23610 371 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 CTGFP29279 349 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 WEE1P30291 646 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 GRK5P34947 590 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 GBX2P52951 348 aaPredicted RBP18.7■□□□□ 0.58
HMGA1-205ENST00000447654 DIO3P55073 304 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 CTBP1Q13363 440 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 SIM2Q14190 667 aaPredicted RBP18.7■□□□□ 0.58
HMGA1-205ENST00000447654 HKDC1Q2TB90 917 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 CYP4Z1Q86W10 505 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 PM20D2Q8IYS1 436 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 FAM86B1Q8N7N1 296 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 C7orf31Q8N865 590 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 ZNF680Q8NEM1 530 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 VANGL1Q8TAA9 524 aaPredicted RBP18.7■□□□□ 0.58
HMGA1-205ENST00000447654 ZNF675Q8TD23 568 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 COL21A1Q96P44 957 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 TMEM209Q96SK2 561 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 TUBB1Q9H4B7 451 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 MID1IP1Q9NPA3 183 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 IL1RAPQ9NPH3 570 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 CACNG4Q9UBN1 327 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 FKBP7Q9Y680 259 aa18.7■□□□□ 0.58
HMGA1-205ENST00000447654 PDCD11Q14690 1871 aaKnown RBP18.7■□□□□ 0.58
HMGA1-205ENST00000447654 PIRO00625 290 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 PPM1BO75688 479 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 CYP7B1O75881 506 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 CDK1P06493 297 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 PFKLP17858 780 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 SLC1A2P43004 574 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 ATXN1P54253 815 aaKnown RBP18.69■□□□□ 0.58
HMGA1-205ENST00000447654 GRK1Q15835 563 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 ZNF79Q15937 498 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 KLHL12Q53G59 568 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 INTS6LQ5JSJ4 861 aaKnown RBP18.69■□□□□ 0.58
HMGA1-205ENST00000447654 CPZQ66K79 652 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 CCDC149Q6ZUS6 474 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 CHPFQ8IZ52 775 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 RBFAQ8N0V3 343 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 ZNF548Q8NEK5 533 aaPredicted RBP18.69■□□□□ 0.58
HMGA1-205ENST00000447654 MARC2Q969Z3 335 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 RHNO1Q9BSD3 238 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms