RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 LRRC20Q8TCA0 184 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 RBBP8Q99708 897 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 KAT8Q9H7Z6 458 aaKnown RBP12.76□□□□□ -0.37
DDX56-206ENST00000446987 OPTCQ9UBM4 332 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 RAPGEFL1Q9UHV5 662 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 PCDHGB2Q9Y5G2 931 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 ATG2BQ96BY7 2078 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 SYNJ2BP-COX16A0A087WUM0 186 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 CCDC154A6NI56 674 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 LEUTXA8MZ59 168 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 PRR33A8MZF0 331 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 UBXN8O00124 270 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 KCNN4O15554 427 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 ACSL4O60488 711 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 TRIM3O75382 744 aaPredicted RBP12.76□□□□□ -0.37
DDX56-206ENST00000446987 ALPLP05186 524 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 ACADMP11310 421 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 CD68P34810 354 aaPredicted RBP12.76□□□□□ -0.37
DDX56-206ENST00000446987 RYKP34925 604 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 SLC6A11P48066 632 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 CXCR3P49682 368 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 CSRP3P50461 194 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 PON2Q15165 354 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 TMEM196Q5HYL7 178 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 PPM1JQ5JR12 505 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 SHEQ5VZ18 495 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 TMEM236Q5W0B7 351 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 FSTL4Q6MZW2 842 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 TPGS1Q6ZTW0 290 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 SPATC1Q76KD6 591 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 RAB43Q86YS6 212 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 CELF2-AS1Q8N7Q2 184 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 CENPIQ92674 756 aaPredicted RBP12.76□□□□□ -0.37
DDX56-206ENST00000446987 GTF2H4Q92759 462 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 LGALS12Q96DT0 336 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 MSANTD3Q96H12 275 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 LRFN3Q9BTN0 628 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 MEAF6Q9HAF1 191 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 PRDM8Q9NQV8 689 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 IARS2Q9NSE4 1012 aaKnown RBP12.76□□□□□ -0.37
DDX56-206ENST00000446987 USE1Q9NZ43 259 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 CCDC59Q9P031 241 aaKnown RBP12.76□□□□□ -0.37
DDX56-206ENST00000446987 COX16Q9P0S2 106 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 CLEC4EQ9ULY5 219 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 OR5K4A6NMS3 321 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 H0YC42 278 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 UBDO15205 165 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 CACNG3O60359 315 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 MOCS2O96007 188 aaPredicted RBP12.75□□□□□ -0.37
DDX56-206ENST00000446987 STMN1P16949 149 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 ARNTP27540 789 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 HOXD9P28356 352 aaPredicted RBP12.75□□□□□ -0.37
DDX56-206ENST00000446987 SEPHS1P49903 392 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 SERPINH1P50454 418 aaKnown RBP12.75□□□□□ -0.37
DDX56-206ENST00000446987 ST13P50502 369 aaKnown RBP12.75□□□□□ -0.37
DDX56-206ENST00000446987 TPD52P55327 224 aaPredicted RBP12.75□□□□□ -0.37
DDX56-206ENST00000446987 TRAF3Q13114 568 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 CCINQ13939 588 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 AGKQ53H12 422 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 Q5BKY6 102 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 TOR2AQ5JU69 321 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 SPANXN3Q5MJ09 141 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 GATAD2AQ86YP4 633 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 SPPL2CQ8IUH8 684 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 MPP5Q8N3R9 675 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 ZNF555Q8NEP9 628 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 FLCNQ8NFG4 579 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 FAM3CQ92520 227 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 SNAPC3Q92966 411 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 PHOX2BQ99453 314 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 ACE2Q9BYF1 805 aaPredicted RBP12.75□□□□□ -0.37
DDX56-206ENST00000446987 SCPEP1Q9HB40 452 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 TAS2R9Q9NYW1 312 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 TRMT6Q9UJA5 497 aaKnown RBP12.75□□□□□ -0.37
DDX56-206ENST00000446987 INTS6Q9UL03 887 aaKnown RBP12.75□□□□□ -0.37
DDX56-206ENST00000446987 USP22Q9UPT9 525 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 PEX16Q9Y5Y5 336 aa12.75□□□□□ -0.37
DDX56-206ENST00000446987 A0A096LPK6 155 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 ARPC4-TTLL3A0A0A6YYG9 625 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 SLC1A7O00341 560 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 NME4O00746 187 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 ARPC2O15144 300 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 ADH1CP00326 375 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 PDGFAP04085 211 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 TYRP14679 529 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 PDGFRAP16234 1089 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 JUNDP17535 347 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 GGT5P36269 586 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 MLLT3P42568 568 aaPredicted RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 CXCR4P61073 352 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 POU6F2P78424 691 aaPredicted RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 S100A12P80511 92 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 EMX1Q04741 257 aaPredicted RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 GAS6Q14393 721 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 TMEM31Q5JXX7 168 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 ADGRF1Q5T601 910 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 PXDC1Q5TGL8 231 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 ASTLQ6HA08 431 aaPredicted RBP12.74□□□□□ -0.37
DDX56-206ENST00000446987 ZNF852Q6ZMS4 543 aa12.74□□□□□ -0.37
DDX56-206ENST00000446987 ZNF683Q8IZ20 524 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms