RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 HSP90B2PQ58FF3 399 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 ARMC6Q6NXE6 501 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 AGTRAPQ6RW13 159 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 SUSD1Q6UWL2 747 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 LRRC69Q6ZNQ3 347 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 USP53Q70EK8 1073 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 ZNF438Q7Z4V0 828 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 SPRED1Q7Z699 444 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 ZNF480Q8WV37 535 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 NCSTNQ92542 709 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 RSC1A1Q92681 617 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 ESAMQ96AP7 390 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 PHF21BQ96EK2 531 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 NAF1Q96HR8 494 aaKnown RBP16.65■□□□□ 0.26
LIME1-202ENST00000444951 UCK1Q9HA47 277 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 RDH14Q9HBH5 336 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 MKS1Q9NXB0 559 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 WWOXQ9NZC7 414 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 NUDT4Q9NZJ9 180 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 SPATA7Q9P0W8 599 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 PLLPQ9Y342 182 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 ACTL7BQ9Y614 415 aa16.65■□□□□ 0.26
LIME1-202ENST00000444951 IGHV1OR21-1A0A087WYE8 117 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 HMGB1P1B2RPK0 211 aaPredicted RBP16.64■□□□□ 0.25
LIME1-202ENST00000444951 BTN3A3O00478 584 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 TYROBPO43914 113 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 CSO75390 466 aaKnown RBP16.64■□□□□ 0.25
LIME1-202ENST00000444951 RPLP0P05388 317 aaKnown RBP16.64■□□□□ 0.25
LIME1-202ENST00000444951 SBK3P0C264 359 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 TAC1P20366 129 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 GPR3P46089 330 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 CCL7P80098 99 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 TLE3Q04726 772 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 NAE1Q13564 534 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 CCDC153Q494R4 210 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 THEMIS2Q5TEJ8 643 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 ANKS6Q68DC2 871 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 SPACA3Q8IXA5 215 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 FBXO39Q8N4B4 442 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 LINC01555Q8NAE3 123 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 OR2L8Q8NGY9 312 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 MGARPQ8TDB4 240 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 PYCR2Q96C36 320 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 FBXL8Q96CD0 374 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 UBL7Q96S82 380 aaPredicted RBP16.64■□□□□ 0.25
LIME1-202ENST00000444951 MENTQ9BUN1 341 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 RAB11FIP5Q9BXF6 653 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 MLXIPLQ9NP71 852 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 HRASLS2Q9NWW9 162 aa16.64■□□□□ 0.25
LIME1-202ENST00000444951 TMEM120BA0PK00 339 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 PMS2P1A4D2B8 440 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 ISM1B1AKI9 464 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 RRP8O43159 456 aaKnown RBP16.63■□□□□ 0.25
LIME1-202ENST00000444951 ZW10O43264 779 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 C1QL1O75973 258 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 GP1BAP07359 652 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 CHRM5P08912 532 aaPredicted RBP16.63■□□□□ 0.25
LIME1-202ENST00000444951 MYL2P10916 166 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 MTHFD2P13995 350 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 HSPA7P48741 367 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 AGTR2P50052 363 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 GABREP78334 506 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 CDKL1Q00532 357 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 MPP2Q14168 576 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 SULT1C3Q6IMI6 304 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 IRGCQ6NXR0 463 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 OOSP2Q86WS3 158 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 ADGRF3Q8IZF5 1079 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 TMEM151AQ8N4L1 468 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 PTGR2Q8N8N7 351 aaPredicted RBP16.63■□□□□ 0.25
LIME1-202ENST00000444951 ATL1Q8WXF7 558 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 RHBDF1Q96CC6 855 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 DEPDC7Q96QD5 511 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 PAIP2Q9BPZ3 127 aaKnown RBP16.63■□□□□ 0.25
LIME1-202ENST00000444951 ACAT2Q9BWD1 397 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 ABCG4Q9H172 646 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 SSU72Q9NP77 194 aaKnown RBP16.63■□□□□ 0.25
LIME1-202ENST00000444951 SPHK1Q9NYA1 384 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 OGFRQ9NZT2 677 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 KLHL3Q9UH77 587 aa16.63■□□□□ 0.25
LIME1-202ENST00000444951 ATXN7L1Q9ULK2 861 aaPredicted RBP16.63■□□□□ 0.25
LIME1-202ENST00000444951 ANKRD12Q6UB98 2062 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 CCDC189A1A4V9 331 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 PIPSLA2A3N6 862 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 OR5K3A6NET4 321 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 LRRC14BA6NHZ5 514 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 ZNF839A8K0R7 811 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 TAPBPO15533 448 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 DUX1O43812 170 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 DLX3O60479 287 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 CCNT2O60583 730 aaKnown RBP16.62■□□□□ 0.25
LIME1-202ENST00000444951 CPA3P15088 417 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 PNLIPP16233 465 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 MPSTP25325 297 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 PSMB5P28074 263 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 CD1CP29017 333 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 HSD17B2P37059 387 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 GDF5P43026 501 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 EPHA4P54764 986 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 PPP1CAP62136 330 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms