RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 TEX19Q8NA77 164 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 C2CD4AQ8NCU7 369 aaPredicted RBP13.49□□□□□ -0.25
TREX1-202ENST00000444177 SLC22A18Q96BI1 424 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 LRRC39Q96DD0 335 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 CLIP3Q96DZ5 547 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 TCTN2Q96GX1 697 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 NDNQ99608 321 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 GPR21Q99679 349 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 WDR83Q9BRX9 315 aaKnown RBP13.49□□□□□ -0.25
TREX1-202ENST00000444177 ERP44Q9BS26 406 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 AARSD1Q9BTE6 412 aaKnown RBP13.49□□□□□ -0.25
TREX1-202ENST00000444177 TRIM55Q9BYV6 548 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 SLC7A5P2Q9GIP4 190 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 RAB17Q9H0T7 212 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 ACTR5Q9H9F9 607 aaPredicted RBP13.49□□□□□ -0.25
TREX1-202ENST00000444177 PCMTD2Q9NV79 361 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 IRAK4Q9NWZ3 460 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 SPATA7Q9P0W8 599 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.49□□□□□ -0.25
TREX1-202ENST00000444177 ARHGEF33A8MVX0 844 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 E7EQ34 232 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 VPS26AO75436 327 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 CATP04040 527 aaKnown RBP13.48□□□□□ -0.25
TREX1-202ENST00000444177 RAB40ALP0C0E4 278 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 MAGP20916 626 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 ITGA1P56199 1179 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 PDIA2Q13087 525 aaKnown RBP13.48□□□□□ -0.25
TREX1-202ENST00000444177 CALCOCO2Q13137 446 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 ZIC1Q15915 447 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 GLE1Q53GS7 698 aaKnown RBP13.48□□□□□ -0.25
TREX1-202ENST00000444177 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.48□□□□□ -0.25
TREX1-202ENST00000444177 CPNE9Q8IYJ1 553 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 ENDOVQ8N8Q3 282 aaKnown RBP13.48□□□□□ -0.25
TREX1-202ENST00000444177 FBXO36Q8NEA4 188 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 CD200R1Q8TD46 325 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 NLNQ9BYT8 704 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 PLAC1Q9HBJ0 212 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 FAM60AQ9NP50 221 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 FAM114A2Q9NRY5 505 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 WHRNQ9P202 907 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 TRMT6Q9UJA5 497 aaKnown RBP13.48□□□□□ -0.25
TREX1-202ENST00000444177 KLHL20Q9Y2M5 609 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 MED16Q9Y2X0 877 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 UTP11Q9Y3A2 253 aaKnown RBP13.48□□□□□ -0.25
TREX1-202ENST00000444177 TEX264Q9Y6I9 313 aa13.48□□□□□ -0.25
TREX1-202ENST00000444177 USP9XQ93008 2570 aaPredicted RBP13.48□□□□□ -0.25
TREX1-202ENST00000444177 ARGFXA6NJG6 315 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 ZNF749O43361 778 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 MATN4O95460 622 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 PDGFAP04085 211 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 CAPN1P07384 714 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 CCL11P51671 97 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 FASTKD3Q14CZ7 662 aaKnown RBP13.47□□□□□ -0.25
TREX1-202ENST00000444177 SF1Q15637 639 aaKnown RBP13.47□□□□□ -0.25
TREX1-202ENST00000444177 PTCHD3Q3KNS1 767 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 FAM69BQ5VUD6 431 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 STEAP4Q687X5 459 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 DUPD1Q68J44 220 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 C8orf74Q6P047 294 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 TRMT10BQ6PF06 316 aaKnown RBP13.47□□□□□ -0.25
TREX1-202ENST00000444177 KIAA0408Q6ZU52 694 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 NEK10Q6ZWH5 1172 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 PIWIL4Q7Z3Z4 852 aaKnown RBP13.47□□□□□ -0.25
TREX1-202ENST00000444177 CNTN4Q8IWV2 1026 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 SYTL1Q8IYJ3 562 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 GPR135Q8IZ08 494 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 ADAMTS17Q8TE56 1095 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 DENND1AQ8TEH3 1009 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 INPP5DQ92835 1189 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 ING2Q9H160 280 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 L2HGDHQ9H9P8 463 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 INTS7Q9NVH2 962 aaKnown RBP13.47□□□□□ -0.25
TREX1-202ENST00000444177 KLHL42Q9P2K6 505 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 TCFL5Q9UL49 500 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 SNX7Q9UNH6 387 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 DHRS7Q9Y394 339 aa13.47□□□□□ -0.25
TREX1-202ENST00000444177 USP9YO00507 2555 aaPredicted RBP13.46□□□□□ -0.25
TREX1-202ENST00000444177 RELNP78509 3460 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 TP73O15350 636 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 PSIP1O75475 530 aaKnown RBP13.46□□□□□ -0.25
TREX1-202ENST00000444177 SYF2O95926 243 aaKnown RBP13.46□□□□□ -0.25
TREX1-202ENST00000444177 HBQ1P09105 142 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 MPC1LP0DKB6 136 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 CBSLP0DN79 551 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 ENO3P13929 434 aaPredicted RBP13.46□□□□□ -0.25
TREX1-202ENST00000444177 MCM3P25205 808 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 PSMB5P28074 263 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 GABRB3P28472 473 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 CBSP35520 551 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 DEKP35659 375 aaKnown RBP13.46□□□□□ -0.25
TREX1-202ENST00000444177 CAV1Q03135 178 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 CHAF1BQ13112 559 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 TSTA3Q13630 321 aaPredicted RBP13.46□□□□□ -0.25
TREX1-202ENST00000444177 RBM20Q5T481 1227 aaKnown RBP13.46□□□□□ -0.25
TREX1-202ENST00000444177 TEDDM1Q5T9Z0 273 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 CPZQ66K79 652 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 UGT3A1Q6NUS8 523 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 CAPN12Q6ZSI9 719 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 ZBED8Q8IZ13 594 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 GPATCH11Q8N954 259 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms