RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 PRAMEF14Q5SWL7 426 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 C9orf50Q5SZB4 431 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 PRAMEF13Q5VWM6 474 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 KANK2Q63ZY3 851 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 LARP4Q71RC2 724 aaKnown RBP eCLIP10.3□□□□□ -0.76
CALD1-210ENST00000443197 CLVS1Q8IUQ0 354 aaPredicted RBP10.3□□□□□ -0.76
CALD1-210ENST00000443197 NUDT8Q8WV74 236 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 LRCH3Q96II8 777 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 PRAP1Q96NZ9 151 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 P2RY13Q9BPV8 354 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 REXO4Q9GZR2 422 aaKnown RBP10.3□□□□□ -0.76
CALD1-210ENST00000443197 AIG1Q9NVV5 245 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 SLC27A6Q9Y2P4 619 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 G3V2T6 193 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 CLIC3O95833 236 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 C1SP09871 688 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 SLC7A1P30825 629 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 ACADVLP49748 655 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 SH3BGRP55822 239 aaPredicted RBP10.3□□□□□ -0.76
CALD1-210ENST00000443197 UBE3AQ05086 875 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 SHHQ15465 462 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 PAGE3Q5JUK9 113 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 PLEKHS1Q5SXH7 462 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 PARGQ86W56 976 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 ENDOVQ8N8Q3 282 aaKnown RBP10.3□□□□□ -0.76
CALD1-210ENST00000443197 ISL2Q96A47 359 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 CLIP3Q96DZ5 547 aa10.3□□□□□ -0.76
CALD1-210ENST00000443197 TRIM45Q9H8W5 580 aaPredicted RBP10.3□□□□□ -0.76
CALD1-210ENST00000443197 RC3H2Q9HBD1 1191 aaKnown RBP10.3□□□□□ -0.76
CALD1-210ENST00000443197 H3BN98 237 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 PRKD3O94806 890 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 IFNA14P01570 189 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 OPN1SWP03999 348 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 MTHFD2P13995 350 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 PBX2P40425 430 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 ZXDBP98169 803 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 TGM3Q08188 693 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 DGCR6Q14129 220 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 FAM109BQ6ICB4 259 aaPredicted RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 ANO7Q6IWH7 933 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 ZCCHC10Q8TBK6 192 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 QRFPRQ96P65 431 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 SLAMF8Q9P0V8 285 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 NDOR1Q9UHB4 597 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 CLIC1O00299 241 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 RPS17P08708 135 aaKnown RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 NR2F1P10589 423 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 CDH1P12830 882 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 KELP23276 732 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 CLCN7P51798 805 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 LAPTM4AQ15012 233 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 BLOC1S3Q6QNY0 202 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 LPCAT2Q7L5N7 544 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 GLB1L3Q8NCI6 653 aaPredicted RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 HIC2Q96JB3 615 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 OSBPL11Q9BXB4 747 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 EXOSC4Q9NPD3 245 aaKnown RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 NEU3Q9UQ49 428 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 ASB1Q9Y576 335 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 STON1Q9Y6Q2 735 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 SPACA6W5XKT8 324 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 MYOCOSA0A1B0GUC4 107 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 SUV39H1O43463 412 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 HSMCR30P0CW71 290 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 ZNF423Q2M1K9 1284 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 HNRNPA1L2Q32P51 320 aaKnown RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 GTDC1Q4AE62 458 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 ZNF776Q68DI1 518 aaPredicted RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 MACC1Q6ZN28 852 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 R3HCC1LQ7Z5L2 792 aaKnown RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 OR7A2PQ8NGA2 310 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 CENPNQ96H22 339 aaPredicted RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 LRIG1Q96JA1 1093 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 SUCOQ9UBS9 1254 aaKnown RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 WDR90Q96KV7 1748 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 A0A1W2PQU0 124 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 E7EQ34 232 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 NDUFS2O75306 463 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 KLF8O95600 359 aaPredicted RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 VIPP01282 170 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 FGF4P08620 206 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 ENGP17813 658 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 RRM2P31350 389 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 ASMTP46597 345 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 HK3P52790 923 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 PTPN5P54829 565 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 BLMHQ13867 455 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 C9orf64Q5T6V5 341 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 ANXA8L1Q5VT79 327 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 NOXRED1Q6NXP6 359 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 TNFAIP8L2Q6P589 184 aaPredicted RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 TMIGD1Q6UXZ0 262 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 TAF8Q7Z7C8 310 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 ADGRD2Q7Z7M1 963 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 TMEM150AQ86TG1 271 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 VRK3Q8IV63 474 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 MICU2Q8IYU8 434 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 OR4E2Q8NGC2 313 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms